Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1025 ATGGAAAATGGAAACACAGCCCACGAACCCGCCAGCTTCTGGACTCAAGCAAACGCTCTCCTCAGAAAGAATTTAACCTTTCAGAAACGAAATGTTAAGACAAACATTAGACTCATCATGACGCCGTTCCTCTTGTGTCTCTTGCTGGTTCTGCTCCAAACCCTGGTGGAGAAGCAACTGGACAAGGCTGAGAACAAGTGTGGCTGCGTCTGTGTTAACAGACAAGGGGACACGTGTCTCGAGGAGCAGTGCGGGGTTGAGCATTCGGATTTGGACCAGGTTTCCACGTGTCCCATTCCCAGCCCTCCGGAATGGCCTCCTCTGTTGCAAGTGCCGGCGCCGCAGTACCGCGCCGTGAGAACGGATTATTTCCCGTTTTCTGATTTTCCAAACACGTCCTGCAGGAGGAACGGCTCTTGCCCTGTCACTATGCTCTTCACTGGCAATAACCAGTCTTTTGGAGAAATTATATCTGGAAATATGATCCCAAGTACCTCGAGTATAAACACCACTGATATTATGGATAGTTTGGCAACAAATGTCGCGGGATCAGAATCAGAGCCAGAGTACACCAATTTTTTGGAACCTGCTTTCTTTTCGGACCTTCCTATTTATTTTCTACAGAATCAGTGCACACAGAACTCTACATTCTCTGTTTCTGTTCAGATATCAGGAATTAGCCAGCAGCAAGAGGTAGTATGTGCTCAGGGTTTACGTTTATGGCGTAATAGTTCCTCCGAGGTGAACGATGAGCTGTATAAAGGTTATCGACAAAGTAACATAGAGAGACAGATCAATGAGATAGCTGCAGGTTATGATTTTTTAAATTCAAATGGGAGTGTATTTAATGTCAGCATATGGTACAACTCAACCTACAAAAATGACACTGGCTTTAATCAAATTGCATTGGCTCGTATTCCTCGTTCTGTAAATTTGGTATCAAATGCCTACCTTCAGTCTCTGTTGGGACCTGGTGCCAAAATGTTTTTTGAGTTTGTTAAGGAAATGCCAAAACCTGAGACCCCAATTAAATTCGATTTGGCTTCTCTTTTGGGTGGTCTCTTCTTTACATGGGTCATTCTGCAACTTTTCCCTATTGCCTTGACATCGCTGGTATATGAGAAGCAACAAAAATTAAGAATCATGATGAAAATGCATGGTCTTGGCGATGGACCATATTGGATGATTTCGTATGGTTATTTTCTTGCCATATCCATTGTCTACATGCTATGTTTTGTGATATTTGGCTCAGTCATAGGCTTGAATTTCTTCACAATGAATGCCTACAGCATCCAATTCGTGTTTTATTTCATCTATATAAATTTACAAATTTCACTGGCTTTTTTATTGGCTTCCTTGTTTTCAAATGTTAAAACTGCTACAGTAATTGCATATATAGGTGTGTTTGGAACTGGACTATTAGCTGGCTTTCTTTTCCAATTTTTTGTTCAAGACACATCGTTTCCAAAAGGATGGATCATTGTTATGGAGTTGTATCCTGGTTTTGCATTATACCGTGGTCTGTACGAGTTTTCGCAATACGCCTTTAATGGTGATGCTTTGGGGACTGATGGTATGCGCTGGAGCGATCTGAGTGATAGCACAAATGGCATGAAGGAGGTCTTGATTATCATGTTCGTGGAGTGGATATTGGTGCTTGTCTTTGCTTATTATATTGACCAGGTTTTGTCATCAGGAAGCAGGAAAAGTCCTCTTTTTTTCTTGAAAGGATTTCAGAAAAAGCCTCATTCATCTCTTCGGAAGCCTAGTTTCCAAAGGCAGAAGTCTAAGGTTTTTGTTCAGATAGAGAAAACTGATGTCACTCAAGAGAGGGAGAAGGTGGAGCAACTTCTACTTGAACCTACTATTAATCAAGCAATTGTGTGCGACAACATGAGAAAGGTTTATCCGGGGAGGGATGGCAACCCAGAGAAACATGCAGTGAGAGGGATGTCCCTTGCATTGCCTCAAGGGGAATGCTTTGGTATGCTTGGTCCCAATGGTGCTGGGAAGACTTCTTTTATCAATATGATGATTGGTCTCACCAAGCCAACCTCTGGTACAGCATTTGTTCAAGGTCTTGACATAAGAACTCATATGGATGGAATATACACTAGCATGGGTGTATGCCCACAGCATGACTTGCTGTGGGAATCCCTGACTGGAAGAGAGCACCTACTCTTTTATGGCAGACTTAAAAATCTTAAAGGTTCAGCCTTAACACAAGCAGTGGAAGAATCGTTGAAAAGTGTAAACCTTTTTCATGGAGGAGTTGCTGATAAACAAGCTGGAAAATACAGTGGAGGAATGAAGAGGAGGCTTAGTGTCGCAATTTCATTGATTGGAGATCCTAAAGTTGTTTATATGGATGAGCCAAGCACTGGATTAGACCCTGCATCAAGAAACAACTTATGGAATGTTGTTAAGCGTGCAAAACAGGATCGTGCAATCATTCTTACCACACATTCCATGGAAGAAGCAGAAGTCCTATGCGATCGATTAGGAATATTTGTAGATGGTAGCTTGCAGTGCATTGGAAATCCAAAGGAGTTGAAAGGCAGGTATGGAGGAACATATGTTTTCACAATGACAACATCTATGGATCATGAAAAGGATGTAGAGAATTTGGTGCGGCAACTCTCACCAAATGCTAACAAGATCTACCATATTTCTGGTACCCAAAAGTTCGAGCTACCAAAGGATGAGGTTAAAATAGCAAATGTATTCCAAGCTGTTGAAACTGCAAAGAGAAGCTTCACCGTTTCAGCGTGGGGTTTAGCTGATACCACATTGGAAGATGTCTTCATTAAAATCTCCATAGGCACCGATATTGACGAGGTAGGTGTCAACGGTTTTCGTGAAGCACTGCATCAAGGCTCTCTAAACTCAGTGGTGGTAATAACCACGTTGCTTTTTTTGACTCTCCATGAATCCAGAAATTATTCTTCTAACACTTTCGAGATCGAAGAGTCTCTCGCTATCGTAGGGCTCCTGCTCCTTGCTCAATCACATGTAAATAGGACGCAGATTGGGTTTTATCAACTCAAGAGAGGAAGTTTGCATCTGAATTTGACAAATTATGGCGCATCACTTATCTCGGTTGTTAATGATTCATGGTACTTTGGAGCCACTGTTGGACGTGTGGCAAATAGAATTGGAGACGCTCAGTTCACATTGGATGGCCATACCTATAAATTGCCTGCTAATGATCACGGCAACACACTCCACGGTGGTTTCATAGGGTTCGGTGATGTTGTATGGACAGTAAGAAGTTACAAGGAAGATGGTCACATAACATTTACTTACGACAGTTATGACAATGAAGAAGGGTTCCCTGGAAGACTCGAAGTAAGTGTGACGTACATGCTCCTTGGCAAAAACAAATTTGGTGTGAAAATGATTGCAAGGCCAATAGACAAAGCCACACCAGTGAACCTGGCACATCACACATACTGGAATCTGAAGGGCCACAACAGTGGTGACATTCTATCACACGAAGTGCAAATCTTCGGCTCACAGATCACACCAGTGAACAAGAAACTCATCCCCACCGGAGAATTCGAGCCGGTGAAGGACACTCCATATGATTTCTTAGAACCAAGGGAAGTTGGGAGCCGAATCAACGACGTTCCTGGTCTATATGACGTGAATTACGTGCTTGATGCAAATCCTAGCCCTAATCACTTCAGAAAAGTGGTTATAGTGAGGGAAAGAGTTTCCGGGAGGAAGATGGAGTTGTGGTCTAACAAACCCGGTCTTCAGTTCTACACCGGTGGCATGTTGACGGATACCAAGGGCAAGGACGGAGCCGTTTATCATAAGCACGGTGGCATGGCCTTGGAGACGCAAGGGTTCCCTGATGCTGTGAATCATCCCAATTTTCCGTCTCAGATTGTGCGTCCTGGCGAGACATATAAGCACTACATGGTCTACAGATTCACGGCTAACTAA 3951 0.4305 MENGNTAHEPASFWTQANALLRKNLTFQKRNVKTNIRLIMTPFLLCLLLVLLQTLVEKQLDKAENKCGCVCVNRQGDTCLEEQCGVEHSDLDQVSTCPIPSPPEWPPLLQVPAPQYRAVRTDYFPFSDFPNTSCRRNGSCPVTMLFTGNNQSFGEIISGNMIPSTSSINTTDIMDSLATNVAGSESEPEYTNFLEPAFFSDLPIYFLQNQCTQNSTFSVSVQISGISQQQEVVCAQGLRLWRNSSSEVNDELYKGYRQSNIERQINEIAAGYDFLNSNGSVFNVSIWYNSTYKNDTGFNQIALARIPRSVNLVSNAYLQSLLGPGAKMFFEFVKEMPKPETPIKFDLASLLGGLFFTWVILQLFPIALTSLVYEKQQKLRIMMKMHGLGDGPYWMISYGYFLAISIVYMLCFVIFGSVIGLNFFTMNAYSIQFVFYFIYINLQISLAFLLASLFSNVKTATVIAYIGVFGTGLLAGFLFQFFVQDTSFPKGWIIVMELYPGFALYRGLYEFSQYAFNGDALGTDGMRWSDLSDSTNGMKEVLIIMFVEWILVLVFAYYIDQVLSSGSRKSPLFFLKGFQKKPHSSLRKPSFQRQKSKVFVQIEKTDVTQEREKVEQLLLEPTINQAIVCDNMRKVYPGRDGNPEKHAVRGMSLALPQGECFGMLGPNGAGKTSFINMMIGLTKPTSGTAFVQGLDIRTHMDGIYTSMGVCPQHDLLWESLTGREHLLFYGRLKNLKGSALTQAVEESLKSVNLFHGGVADKQAGKYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRNNLWNVVKRAKQDRAIILTTHSMEEAEVLCDRLGIFVDGSLQCIGNPKELKGRYGGTYVFTMTTSMDHEKDVENLVRQLSPNANKIYHISGTQKFELPKDEVKIANVFQAVETAKRSFTVSAWGLADTTLEDVFIKISIGTDIDEVGVNGFREALHQGSLNSVVVITTLLFLTLHESRNYSSNTFEIEESLAIVGLLLLAQSHVNRTQIGFYQLKRGSLHLNLTNYGASLISVVNDSWYFGATVGRVANRIGDAQFTLDGHTYKLPANDHGNTLHGGFIGFGDVVWTVRSYKEDGHITFTYDSYDNEEGFPGRLEVSVTYMLLGKNKFGVKMIARPIDKATPVNLAHHTYWNLKGHNSGDILSHEVQIFGSQITPVNKKLIPTGEFEPVKDTPYDFLEPREVGSRINDVPGLYDVNYVLDANPSPNHFRKVVIVRERVSGRKMELWSNKPGLQFYTGGMLTDTKGKDGAVYHKHGGMALETQGFPDAVNHPNFPSQIVRPGETYKHYMVYRFTAN 1316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1025 1316 ProSitePatterns ABC transporters family signature. 766 780 IPR017871 GO:0005524
Aed10g1025 1316 Gene3D - 619 891 IPR027417 -
Aed10g1025 1316 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 9 941 IPR026082 GO:0016021|GO:0055085|GO:0140359
Aed10g1025 1316 CDD ABC_subfamily_A 631 852 - -
Aed10g1025 1316 SMART AAA_5 657 840 IPR003593 -
Aed10g1025 1316 Pfam ABC-2 family transporter protein 278 558 - -
Aed10g1025 1316 SUPERFAMILY Galactose mutarotase-like 1004 1313 IPR011013 GO:0003824|GO:0005975|GO:0030246
Aed10g1025 1316 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 626 855 IPR027417 -
Aed10g1025 1316 CDD galactose_mutarotase_like 1024 1313 - -
Aed10g1025 1316 Pfam ABC transporter 649 793 IPR003439 GO:0005524
Aed10g1025 1316 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 627 864 IPR003439 GO:0005524
Aed10g1025 1316 Pfam Aldose 1-epimerase 1033 1312 IPR008183 GO:0005975|GO:0016853
Aed10g1025 1316 Gene3D - 1001 1315 IPR014718 GO:0030246
Aed10g1025 1316 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 9 941 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1025 Aed-Chr10 9013176 9027264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1025 992 1316 Miscellaneous Gene Families AT3G47800 55.620 5.55e-130 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1025 - - gmx:100805474 1743.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1025 10 9013176 9027264 Aed10g1025 10 9013176 9027264 ECH