Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1020 ATGGCCAGTACTGAGGCAGCAGGCAGAAATACAAGACGACCAGTGGTTGAAGAGATCGTACCTTATTCGGGATGGACAGACGACCATTCAAGCTATTTTCTTCTTGTGGATCTTCCTGAATTCAAGAAGGAGGAGGTGATCCTTCAAGTTGATAGCTCCAGTGACCGTCTAATTGTGAAAGGAGAAAGGCAAACAAATGAACAGAAACGCGTCCACTTCGAGCTAGCTTTTCCATTGCCACCAGATTCAGATGTAGATAACATATCCGGAAACTTCGATAGCGAAATCCTTCACGTGTGTGTCCCCAAGCGAGCTTCTTCTTCTTCACAGCATGAAGAGCACAGAGAATTAAGTGATGATCATGATCATGATGATCATGAGATAGAGAAAGCTTCAAATGGCAGTAATGTGGAACACAACAATGTTGTTAATAACGAGGGGAGGGATATTATTCATGGTCATGATCAACAACATGAGGAAGAACATAGAAATGAAAATGCACAGTACTATAGCTATGTGGATGATGATGATTATTCTAAAAAATTAACAAGGGATAAATTGGAGCAGAAGCGCGACATTTCAAGAGCTATAGTGAAGATTTTGATGAGAAACAAGGGAGTTGTTACAACTGCTGTTGTGGCCTTTTCGTTTGGGTTGTATGTATCTCGTAAGTTTCATTCATGGAATGAACCATAA 696 0.408 MASTEAAGRNTRRPVVEEIVPYSGWTDDHSSYFLLVDLPEFKKEEVILQVDSSSDRLIVKGERQTNEQKRVHFELAFPLPPDSDVDNISGNFDSEILHVCVPKRASSSSQHEEHRELSDDHDHDDHEIEKASNGSNVEHNNVVNNEGRDIIHGHDQQHEEEHRNENAQYYSYVDDDDYSKKLTRDKLEQKRDISRAIVKILMRNKGVVTTAVVAFSFGLYVSRKFHSWNEP 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1020 231 MobiDBLite consensus disorder prediction 104 142 - -
Aed10g1020 231 CDD ACD_sHsps_p23-like 25 103 - -
Aed10g1020 231 PANTHER INACTIVE PROTEIN RESTRICTED TEV MOVEMENT 2-LIKE 11 230 - -
Aed10g1020 231 Pfam Hsp20/alpha crystallin family 26 111 IPR002068 -
Aed10g1020 231 PANTHER HEAT SHOCK PROTEIN 26 11 230 IPR045045 -
Aed10g1020 231 SUPERFAMILY HSP20-like chaperones 15 108 IPR008978 -
Aed10g1020 231 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 13 120 IPR002068 -
Aed10g1020 231 MobiDBLite consensus disorder prediction 107 133 - -
Aed10g1020 231 Gene3D - 3 110 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1020 Aed-Chr10 8954912 8956025 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1020 - - gmx:100802285 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1020 10 8954912 8956025 Aed10g1020 10 8954912 8956025 ECH