Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1010 ATGAGGGCTGATATATTTAGCTTCTGCCCCAAGTTGTTGGAAAAGTCTTACTATCCCTTCGACAGCATAGGAGCCGCCACCCTGCTTCTCTTACCTTCTCAACCCATTCTATTCTATGTTCTATGCTTCCACTTCCACACCATTGAAACGATGCAGAATATGTTAAGAGCAAAGCAGATCAGTAGTACTCTTTCAAGCAATGCTAGGAGTTTTTTGCTCAGCGGCTCACGCTGCAATGCATCAGATGGCAATTCATGCACTTGCCCTGAGGATGAGACTTGTGTGTCGAAAAGACAGCAGAGGAAAAACAATGAAGATTTGCTTGCACCGAATCTGAAGCTGAAGCCAGCCTCCTTAGTGTCCAAAGCCACATCTCAAGTTGTAGGAACACTGGTTTTGGGAAGCTTGGTGAATGGGCCGGCTTCCCACAAGGCCGGTGTTGGCCAAGCCGGCCATGCACAAGTCCGGCCTACTTCGTATGCACCGAGTGAATCAGAGTCTGTTATACATGCTGGTGCTGGTGCTGTTGTTGATGGTGTTCAGGAGCATGTTGTTGTTGTTCACTCGTCTTCTCTTAATGCTGACCAGTTTTATAGGGCCGGCATTGCAGCTGTAAATTTTATTTCTGATGTAGTTAATTATAAGTTTCCTTTATCAGATGGAATGGGAATACTAAGCGTTTCTAAAAATTGTATGGTTGATCCTACCAGAGCCATACCCAACATCAGATCTTCCAATGTGCAGAAAATTAGAAAGGAGAGCTTTACCGCCATTCATCCCAAACCACCTGCTGTTCCTGCTCATCCAGGGCCGTCAAAACATGCAAATAATCATCACGGTGCCAAGGGAAAAGCTGACAGATCAAATTTAGCTAAAGGCTTTAAGTATGCTGCTGCTTCTTCAGGGACAGAGAAGTCAGGGGCAGCTCCAAATGTTCCTGTAAATAACCATGATCATCGCCGAGCCTTGCCACAGAGAACAAGACCCCATTCAAACCACTTTGTAACTAATTTTGGTTCCAACATGCAAAGTTCAAATCCACAAAGTTTCAATAGACAACACACAAGGGATCTGAATATGCCAACAGGAATTGCTCCAATGAAGAGGCATTTTACTAATTCAGGGCATGTTGTGGAAGTGGTTAAAGATATACTGGGACAGTTAAAGTGGGGTCCTGCTACTGAGAAGGCTCTTTATAACCTGAATTTTTCAATTGATGCATATCAAGCTAACCAGATCCTAAAGCAACTTCAAGACCATTCGGTTGCTCTAAGCTTCTTTTACTGGCTAAAGCATCAAGCAGGATTCAGGCATGACGGGCATACTTACACAACCATGGTTGGCATCCTTGGCCGTGCAAGGGAGTTTGGTGCTATAAACAAATTGCTAGAGCAGATGGTGAAGGATGGATGCCAGCCTAATGTTGTTACCTACAACCGTCTGATTCACAGCTATGGCCGTGCAAACTACCTAAGGGAGGCACTGAATGTGTTTAACCAGATGCAGGAGATGGGATGCAAGCCTGATCGTGTTACTTACTGCACGCTCATTGATTTACATGCAAAAGCTGGATTTCTTGATGTGGCCATGTCTATGTATGAAAGAATGCAAGAAGCCGGCCTTTCTCCTGACACGTTTACATACAGTGTCATGATCAACTGCCTTGGGAAATCTGGTAATTTATCTGCTGCACATAGGCTATTCTGTGAGATGGTTGATCAGGGCTGTGTTCCGAATATCGTCACATACAATATCTTGATTGCTCTGCAAGCCAAAGCAAGGAACTACCAGACAGCATTGAAACTATACCGTGACATGCAGAATGCGGGGTTTAAACCAGACAAAGTTACTTACAGCATTGTAATGGAGGTGCTTGGCCACTGTGGGTATCTTGAGGAAGCAGAAGCAGTGTTCTTTGAGATGAAACAGAACAAGTGGATTCCGGATGAACCTGTTTACGGTCTTCTGGTAGACCTGTGGGGGAAGGCTGGTAATGTGGAGAAGGCTTGGGAATGGTATCATGCAATGCTGGGAGCCGGTTTGCTTCCAAATGTACCAACTTGCAATTCACTTCTCAGTGCATTCCTAAGGGTGCATCGATTGCCAGACGCATATAACCTACTCCAAAACATGGTGGCTCTTGGCTTAAACCCCTCTCTGCAGACCTACACTCTGCTTCTCAGCTGTTGCACGGAGGCGCAGTCAACGTATGATATGGGATTTTGTTGCGAGCTTATGGCGGTCACCGGCCATCCTGCACATGCATTTCTCCAGTCCATGCCAGCATCGGGACCGGACGGTCAAAACGTGAGGGATCATGTAAGCAAATTCCTAGATTTCATGCATTCCGAGGATAGAGAGGGCAAAAGAGGGCTTGTGGATGCGGTGGTTGATTTTCTTCACAAATCTGGACTCAAGGAGGAGGCTGGTTTGGTCTGGGAGGTTGCTGCACAGAAAAACGTGTATCCTGATTCAGTCAAGGAGAAAAGCTCTTGTTACTGGCTCATAAACCTTCATGTGATGTCTGATGGAACTGCTGTGACAGCATTGTCTAGGACACTTGCTTGGTTTCGCAAGCAGATGCTGGCATCCGGGGTTGGCCCTAGCCGGATTGATATCGTCACCGGATGGGGCCGGAGGAGTAGGGTGACAGGCTCCTCTCTTGTGAGGCAGGCAGTGCAGGAGCTGCTGCATTTGTTCAGTTTCCCGTTTTTCACAGAAAATGGGAACTCAGGTTGTTTTGTGGGGTGTGGGGAGCCTCTTAGTGAATGGTTGGTCCACTCTTATGTGGAAAGAATGCATTTACTGTAG 2811 0.4632 MRADIFSFCPKLLEKSYYPFDSIGAATLLLLPSQPILFYVLCFHFHTIETMQNMLRAKQISSTLSSNARSFLLSGSRCNASDGNSCTCPEDETCVSKRQQRKNNEDLLAPNLKLKPASLVSKATSQVVGTLVLGSLVNGPASHKAGVGQAGHAQVRPTSYAPSESESVIHAGAGAVVDGVQEHVVVVHSSSLNADQFYRAGIAAVNFISDVVNYKFPLSDGMGILSVSKNCMVDPTRAIPNIRSSNVQKIRKESFTAIHPKPPAVPAHPGPSKHANNHHGAKGKADRSNLAKGFKYAAASSGTEKSGAAPNVPVNNHDHRRALPQRTRPHSNHFVTNFGSNMQSSNPQSFNRQHTRDLNMPTGIAPMKRHFTNSGHVVEVVKDILGQLKWGPATEKALYNLNFSIDAYQANQILKQLQDHSVALSFFYWLKHQAGFRHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQMQEMGCKPDRVTYCTLIDLHAKAGFLDVAMSMYERMQEAGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMKQNKWIPDEPVYGLLVDLWGKAGNVEKAWEWYHAMLGAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVALGLNPSLQTYTLLLSCCTEAQSTYDMGFCCELMAVTGHPAHAFLQSMPASGPDGQNVRDHVSKFLDFMHSEDREGKRGLVDAVVDFLHKSGLKEEAGLVWEVAAQKNVYPDSVKEKSSCYWLINLHVMSDGTAVTALSRTLAWFRKQMLASGVGPSRIDIVTGWGRRSRVTGSSLVRQAVQELLHLFSFPFFTENGNSGCFVGCGEPLSEWLVHSYVERMHLL 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1010 936 Gene3D - 813 915 IPR036063 -
Aed10g1010 936 Pfam PPR repeat 442 471 IPR002885 -
Aed10g1010 936 Pfam PPR repeat 652 680 IPR002885 -
Aed10g1010 936 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 684 718 IPR002885 -
Aed10g1010 936 SMART SMR_2 833 925 IPR002625 -
Aed10g1010 936 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 614 648 IPR002885 -
Aed10g1010 936 Gene3D Tetratricopeptide repeat domain 524 624 IPR011990 GO:0005515
Aed10g1010 936 Gene3D Tetratricopeptide repeat domain 393 523 IPR011990 GO:0005515
Aed10g1010 936 Gene3D Tetratricopeptide repeat domain 625 739 IPR011990 GO:0005515
Aed10g1010 936 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 474 508 IPR002885 -
Aed10g1010 936 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 649 683 IPR002885 -
Aed10g1010 936 PANTHER OS03G0856100 PROTEIN 54 936 - -
Aed10g1010 936 SUPERFAMILY SMR domain-like 834 914 IPR036063 -
Aed10g1010 936 Pfam PPR repeat family 578 624 IPR002885 -
Aed10g1010 936 Pfam PPR repeat family 683 730 IPR002885 -
Aed10g1010 936 Pfam PPR repeat family 473 520 IPR002885 -
Aed10g1010 936 ProSiteProfiles Smr domain profile. 836 917 IPR002625 -
Aed10g1010 936 MobiDBLite consensus disorder prediction 329 352 - -
Aed10g1010 936 Pfam PPR repeat 540 572 IPR002885 -
Aed10g1010 936 MobiDBLite consensus disorder prediction 261 352 - -
Aed10g1010 936 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 439 473 IPR002885 -
Aed10g1010 936 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 544 578 IPR002885 -
Aed10g1010 936 PANTHER BNAA07G31720D PROTEIN 54 936 - -
Aed10g1010 936 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 579 613 IPR002885 -
Aed10g1010 936 TIGRFAM PPR: pentatricopeptide repeat domain 476 509 IPR002885 -
Aed10g1010 936 TIGRFAM PPR: pentatricopeptide repeat domain 581 614 IPR002885 -
Aed10g1010 936 TIGRFAM PPR: pentatricopeptide repeat domain 616 650 IPR002885 -
Aed10g1010 936 TIGRFAM PPR: pentatricopeptide repeat domain 652 685 IPR002885 -
Aed10g1010 936 TIGRFAM PPR: pentatricopeptide repeat domain 441 475 IPR002885 -
Aed10g1010 936 TIGRFAM PPR: pentatricopeptide repeat domain 546 580 IPR002885 -
Aed10g1010 936 TIGRFAM PPR: pentatricopeptide repeat domain 511 545 IPR002885 -
Aed10g1010 936 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 509 543 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1010 433 798 Glycosyltransferase AT1G05670 27.297 1.02e-36 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1010 - - gmx:100781029 1586.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1010 10 8869104 8872985 Aed10g1010 10 8869104 8872985 ECH