Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1004 ATGAAGGGTGTCCTTTCCATCAGCTTCTTGTTTTGTTGCTTGCTGCTGCTTTTGGATTCTTCAATTTCACTTCCTCTATGTGTTGATTCAAGGGAGCTATTTACAGTTCAATCTTCACCTAGATCAGTTCCTGTTCTTTGCAACTCCACCGTACAAGCAAATTCTTCTCAATCAAAGACAGAAGTGGAAGATTTTTGCTCTCAAGTATGGGACACATGCAAAGATGCATCCATAGTGAATTCTCCATTTGCCCCTTCATTGCAAGGCCAAGCAGGAGCACCGGTTCACACCAATGCAACCAAACTCACTGATTTATGGCAGTCCAAAACAGACTTTTGCACTGCATTTGGTGGAGCATCTGATAATTCATCAGTGTGCTTTGAAGGTGAACCTGTTTCACTGGATAAAAATGAGACCTCTATTAGTCCCCCTCATGGCTTGTGCCTCGAGAGAATTGGTAATGGATCTTATCTCAACATGGTGGCTCATCCTGATGGCTCTAACCGTGCATTCTTCTCTAACCAAATGGGCAAGGTTTTTCTGGCAACACTTCCGGACAAGGGATTGGGAGGAACTATGAAGCTTGATGAATCAAGTCCTTTTGTCGATCTAACTGATCAAGTTTATTTTGATACTCAATTTGGAATGATGGGCATGGCATTTCATCCAGATTTTGCTAAGAATGGACGATTCTTTGCTTCGTTTACATGTGATAAGTCCAAATGGTCTGGATGTACTGGAAGATGTTCTTGTAATTCAGATGTTAACTGTGATCCGTCAAAGATAGGTACTGATCATGGTGCTCAACCATGCCAATATCAAACCGTGGAAAGTGCTAAACCAACGGAAGTGAGAAGAATATTTACCATGGGGCTCCCATTTACATCTCAACATGGTGGTCAAATACTCTTTGGACCTGATGATGGGTATTTATACTTAATGATGGGATATGGAGGAGGTGCAGGTGATCCTTACAATTTTGCACAAAACAAGAAATCCTTGCTTGGAAAGATTATGAGGCTTGATGTAGACACCATCCCAAGTGCAGCAGAAATTAGCAAACTCAGCCTTTGGGGTAACTACTCCATTCCAAAGGACAATCCATATAGTGAAGATAAAGATCTGCAGCCTGAAATATGGGCTTTGGGACTAAGGAATCCTTGGCGTTGCAGTTTTGATGCAGAAAAACCTTCCTACTTTTTGTGTGCAGATGTTGGACAGGATGTTTATGAGGAGGTGGATCTCATCACAAAGGGTGGAAACTATGGCTGGCGTGTTTATGAGGGGCCCTATCTGTTCCACCCGGCAGAATCACCTGGAGGAAATACTTCGTGCGACTCTGCACCTGGAAACCTTCCTGCTTTAGGCTACATCTTCTCATTTGGCGAAGACAACAACAAAGACGTTTACATCCTCGCCAGCACCGGTGTTTACCGGGTTGTTCGTCCGAGTCGCTGCAGCTATGCTTGCTCTCAGGAAACGGCTACTAATACTACAACGTCACCTCCCTCTCCTTCTCCTTCTCATGCTACACGTTGGAGTGTTCCTTCTGGGTATCTGTTTTTGCAGTGTTTATCTTTCTTGTTGATTTTGCTTGGTTTTATGTAG 1608 0.4341 MKGVLSISFLFCCLLLLLDSSISLPLCVDSRELFTVQSSPRSVPVLCNSTVQANSSQSKTEVEDFCSQVWDTCKDASIVNSPFAPSLQGQAGAPVHTNATKLTDLWQSKTDFCTAFGGASDNSSVCFEGEPVSLDKNETSISPPHGLCLERIGNGSYLNMVAHPDGSNRAFFSNQMGKVFLATLPDKGLGGTMKLDESSPFVDLTDQVYFDTQFGMMGMAFHPDFAKNGRFFASFTCDKSKWSGCTGRCSCNSDVNCDPSKIGTDHGAQPCQYQTVESAKPTEVRRIFTMGLPFTSQHGGQILFGPDDGYLYLMMGYGGGAGDPYNFAQNKKSLLGKIMRLDVDTIPSAAEISKLSLWGNYSIPKDNPYSEDKDLQPEIWALGLRNPWRCSFDAEKPSYFLCADVGQDVYEEVDLITKGGNYGWRVYEGPYLFHPAESPGGNTSCDSAPGNLPALGYIFSFGEDNNKDVYILASTGVYRVVRPSRCSYACSQETATNTTTSPPSPSPSHATRWSVPSGYLFLQCLSFLLILLGFM 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1004 535 PANTHER HIPL1 PROTEIN-LIKE 30 438 - -
Aed10g1004 535 PANTHER HIPL1 PROTEIN-LIKE 444 528 - -
Aed10g1004 535 Pfam Glucose / Sorbosone dehydrogenase 199 427 IPR012938 -
Aed10g1004 535 PANTHER HEDGEHOG-INTERACTING PROTEIN 444 528 - -
Aed10g1004 535 PANTHER HEDGEHOG-INTERACTING PROTEIN 30 438 - -
Aed10g1004 535 Gene3D - 153 508 IPR011042 -
Aed10g1004 535 SUPERFAMILY Soluble quinoprotein glucose dehydrogenase 137 436 IPR011041 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1004 Aed-Chr10 8809055 8813984 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1004 - - gmx:100778890 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1004 10 8809055 8813984 Aed10g1004 10 8809055 8813984 ECH
Aed6g1526 6 19460096 19464275 Aed10g1004 10 8809055 8813984 PCT