Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0993 ATGCCTCACGCCACAGCAACGCAAACGCAGAACATAAAGCAGAGGGTACTCACGTGCCTCACGAAGCTCTCGGACCGCGACACGCAGGCCGCGGGAGCCACCGAGCTCGAGTCCATCGCGCGCACCCTGGACTCGCACTCCGTGCCGGTGTTTCTTTCCTGCATCCACTCCACCGACTCCTCCGACAAAACCCCCGTCCGCAAGCAATGCGTGCACCTCGTCGCCACGCTCTCCCACGCGCACGGCGACGCGCTCTCTCCTTTCCTATCCAAAATCCTCGCCAACCTTATCCGCCGCCTCCGCGACCCTGACTCCTCCGTTCGGACCGCCTGCGCCGATACGTGCGCCGCATTGTCTGCGCGCGTCACGCGCCAGCCTTTCGCCGCGTTCCTCAAGCCGCTGGCGGAGGCGCTCTTCACGGAGCAGGACCCGAGCTCGCAGGCCGGAGCCGCGCACTGCCTCGCCTCCGCGATCGACGGCGCTCCGGATCCGGACCCGGCCAGGCTGGCCAGGCTCCTCCCGAGGCTCGAGAGGCTGCTCAAGAGCAAGGTGTTCAGGGCTAAGCCCGCGCTGCTGGCGCTCGTCGGAAGCGTCGTCGAGGCTCGCGGCGCGGCGAGCCGCGCCGCACTGAGGAATTTGGTTCCTTGCCTTGTGGAGGCGCTCGGCAGCGAGGACTGGGCCACCAGGAAGGGCGCCGCGGAGGCGTTGAAGAAACTCGCCACCGTGGAGAGGGACGTGCTGTCGGAGTTCAAGGGTGGATGCTTGAAAGCGTTCGAGAATCGGCGATTTGATAAGGTAAAGTCTGTACGGGAAGTTATGAATCAGATGTTGGAGGCGTGGAAGCAGATTCCTGATGTTTCTGATGAATTTTCTCCACCTCCACAATCGCAGTCGTCTTCAAAGGAGAATGCAAGTGATGGGCGCTATCCTCCTGTATCTCACAATTCATGTAGTCCGGGTTCTGTAATGAGTAAATTGAGGAAGAAATCAAGCCCAGTTAGCAAATCAACTCCACCAGATAGATCTGCTGCTAGGAATGCTAAAAGGATGAGTTCAGGTGTTCTGCAGAAACTGAACCATGACCAATGGGATGTTCAAATTACTGTGTCAAATGTTCCTGATCGTGGTAATCATCGACAGAAGGATGAAGATGTTGTTTCGGAAAGAAGCAAAAAGGATAAAAGCAGAATTTTTAAGCCAGAAACAAAACGGGCTCTATTTGATAAAAATTCTGATGACAAGATGCTTAAATTGGGTGTGTCCAAAGCTGGATCTCGTGTGGTTCCTTGTTCTGAAGAGAGTCAAGACTCAGGTCCTGTCTGTAATGTAACCAAGGATCTCCATAGGAATGACAAAGAGAGTGAGGAATTATCTTTGATTCGTGCCCAGTTAGTTCAAATTGAGAAGCAGCAGTCAAGTCTGCTTGATCTTCTACAGAAATTCATGGGGAACTCTGAAAATGGAATGCGTACTTTAGAGACTCGTGTGCATGGCCTCGAGGTTGCATTGGATGAGATCTCTTATGATTTGGCTGTATCAAGTGGAAGGATAACTAAATCTGATGCTCCTAAGAACACTTGTTGCCTGCTACCTGGTGCTGAATTTTTAAGCTCCAAATTCTGGAAGAAAACACCGGGTTGGTATTCATCGTACCGGTTCTCTAGAACTGGTAGCACTCCATTACTAGCTTCCAATCATTACAGAGCTAATAGGAATGCCGAATCTAGTAGGCCTACAAGCCACAGATTTGGGGTCCATGGTGATGGAAGTTTCATCACTAATCCTCTGGCAGAGATTAAAATTAATTCAAGGGAGATTTGA 1821 0.5272 MPHATATQTQNIKQRVLTCLTKLSDRDTQAAGATELESIARTLDSHSVPVFLSCIHSTDSSDKTPVRKQCVHLVATLSHAHGDALSPFLSKILANLIRRLRDPDSSVRTACADTCAALSARVTRQPFAAFLKPLAEALFTEQDPSSQAGAAHCLASAIDGAPDPDPARLARLLPRLERLLKSKVFRAKPALLALVGSVVEARGAASRAALRNLVPCLVEALGSEDWATRKGAAEALKKLATVERDVLSEFKGGCLKAFENRRFDKVKSVREVMNQMLEAWKQIPDVSDEFSPPPQSQSSSKENASDGRYPPVSHNSCSPGSVMSKLRKKSSPVSKSTPPDRSAARNAKRMSSGVLQKLNHDQWDVQITVSNVPDRGNHRQKDEDVVSERSKKDKSRIFKPETKRALFDKNSDDKMLKLGVSKAGSRVVPCSEESQDSGPVCNVTKDLHRNDKESEELSLIRAQLVQIEKQQSSLLDLLQKFMGNSENGMRTLETRVHGLEVALDEISYDLAVSSGRITKSDAPKNTCCLLPGAEFLSSKFWKKTPGWYSSYRFSRTGSTPLLASNHYRANRNAESSRPTSHRFGVHGDGSFITNPLAEIKINSREI 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0993 606 MobiDBLite consensus disorder prediction 284 351 - -
Aed10g0993 606 PANTHER TORTIFOLIA1-LIKE PROTEIN 3 7 605 - -
Aed10g0993 606 SMART TOG_3 35 272 IPR034085 -
Aed10g0993 606 MobiDBLite consensus disorder prediction 375 395 - -
Aed10g0993 606 MobiDBLite consensus disorder prediction 372 395 - -
Aed10g0993 606 Coils Coil 450 470 - -
Aed10g0993 606 MobiDBLite consensus disorder prediction 289 341 - -
Aed10g0993 606 Pfam HEAT repeat 213 241 IPR000357 GO:0005515
Aed10g0993 606 Gene3D - 1 372 IPR011989 -
Aed10g0993 606 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 7 605 IPR033337 GO:0005874|GO:0008017
Aed10g0993 606 SUPERFAMILY ARM repeat 9 297 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0993 Aed-Chr10 8711107 8715285 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0993 - - gmx:100778310 1004.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0993 10 8711107 8715285 Aed10g0993 10 8711107 8715285 ECH
Aed6g1504 6 19272041 19276194 Aed10g0993 10 8711107 8715285 PCT