Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0992 ATGGCTAGAGGGTCGCTTGGAGAATACCTTGGATTGAAGGAAGATGTCATCAAGAAGGTGTGTGGCTTGTCTCTGAAAGCTCACAGCCACAGAGACAAAGACAAGCTCTACTTTTACGAAAAGGTTCAAGTTTCTTCTGTGACTTACCATGTTTTCAGCTTCTCGGGATCTTGGGACCCCGCTGAATGGTTTGTTGACAAAGAAAAACCCTTTGGGGTAACGAAGATAGATCTTACCCAGTTTCCTCCACTCAGAAGTATTGGCAACGATGAAGCTGCTTTGGTCAACGAGGGCTTCGCTAAGAGATTCGATCGCATATTGCAAACTACTAGGTTCGAAACCGAGGTGAATAAGGCTATTGGAGATGGGAAGCAAGTAGTGTTTACGGGGCACTCCTCTGGTGCTGCTATTGCCGATTTAGCAACGTTTTGGGCATTGGAAAAGTACCGTAACCAAAAACCCTTTTGTGTGACTTTTGGGTCTCCCTTAATTGGCAATCATATATTCTCTCACGCTTCAAGGAGAGAAAAATGGTCTCACTATTTCATACACTTTGTTCTGAGATATGACATAGTGCCACGGATTTTGCTTGCTCCAGCCTCTTCTATTGAGCAAACTTTTGGTCCCATTCTCCAATTCTTGCATCCAAAGTCCAAAACTTCCTCCACCCAAGATCCAAAAATCTCTGAATTCTACAAAACTGTGATGAGAAACGCAGCCAGTGTTACAAGCCGTGCCGCGTGTATTCTAATGGGGAGCACAAATTTGTTGCTTGAAACAGTGGCGAATTTCGTGGAGTTGAGCCCTTATAGGCCCTTTGGAACATACGTTTTCTGCAACGGGAATGGACAGCTGGTTGTGGTGAAAAACTCAGATGCTGTTTTGCAACTCTTGTTCCACACTGCTCAGCTTAGCAATTTGGAGGAACTTCAAGAAGTTGCCAACAATAGCATATCGCAACACGTGAACTATGAGCGTGAATTGGACGATAGCTTATTGGGAATGCAGACTGTGGTGTACTTGGAGTTGGAGCAACTTGAGCAGCTTCCCTTGTCCGCTGATGGTTCTAATACTGATGTTGTCGCAGCCTTGGATGGCCTTGGACTGAGCACGAGAGCAAGGCTGTGTCTACGAGCAGCCGGTGAGTTGGAGAAGCAGAAACGGAAAAACGAGGACAAAATCAAGAAGGAGATCAAGGACAAAGCCGTGGGAAGCATGACAGACCTTAATAATTACAAAACAACATGTGAGATGCACAGAGGGAAGGGCTACTACGACGCCTTCAAGGTGCAAAAGGAAGGAAACGACTTCCAAGCAAACGTGAAGAGGCTCGTGCTGGCAGGTGTGTGGGACGAAGTCATTGAGATGCTGAAAAGATATGAACTCCCAGATGAGTTTGAAGGCAACGAATACTGGATCAATCTCGGGACCGAGTTCCGACGCCTCGTGGAGCCTCTAGACATTGCAAACTACTACCGCCACCTGAAGAACGAGGACACGGGGCCTTACATGATCAGGGCAAGGCCGAAGCGTTATAGGTACACTCAAAGATGGTTGGAGCATACCAAGAGGGTGCAAAAACCTGCTGTTATCACTGAATCAACCTTTTGGGCTGAAGTGGAAGAGCTTCATAGCTGGATTAACAGCAAGGAGCCTCTTGATGATGAAGTGAAGGAAAGGGTTAAGCATCTTCAAGAGGATCTTAAAAAGTGGACTGGTGAGGAAGGGGTGCTAACTAAGGACACGTTCTTAAAGGATCCTAACTTTGTTAGGTGGTGGAATATTCTACCTCAGGCACTCAAAGTCACTTCCTTCTAG 1818 0.4615 MARGSLGEYLGLKEDVIKKVCGLSLKAHSHRDKDKLYFYEKVQVSSVTYHVFSFSGSWDPAEWFVDKEKPFGVTKIDLTQFPPLRSIGNDEAALVNEGFAKRFDRILQTTRFETEVNKAIGDGKQVVFTGHSSGAAIADLATFWALEKYRNQKPFCVTFGSPLIGNHIFSHASRREKWSHYFIHFVLRYDIVPRILLAPASSIEQTFGPILQFLHPKSKTSSTQDPKISEFYKTVMRNAASVTSRAACILMGSTNLLLETVANFVELSPYRPFGTYVFCNGNGQLVVVKNSDAVLQLLFHTAQLSNLEELQEVANNSISQHVNYERELDDSLLGMQTVVYLELEQLEQLPLSADGSNTDVVAALDGLGLSTRARLCLRAAGELEKQKRKNEDKIKKEIKDKAVGSMTDLNNYKTTCEMHRGKGYYDAFKVQKEGNDFQANVKRLVLAGVWDEVIEMLKRYELPDEFEGNEYWINLGTEFRRLVEPLDIANYYRHLKNEDTGPYMIRARPKRYRYTQRWLEHTKRVQKPAVITESTFWAEVEELHSWINSKEPLDDEVKERVKHLQEDLKKWTGEEGVLTKDTFLKDPNFVRWWNILPQALKVTSF 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0992 605 Pfam Enhanced disease susceptibility 1 protein EP domain 408 594 IPR041266 -
Aed10g0992 605 Pfam Lipase (class 3) 51 195 IPR002921 GO:0006629
Aed10g0992 605 Coils Coil 554 574 - -
Aed10g0992 605 PANTHER ENHANCED DISEASE SUSCEPTIBILITY PROTEIN 1 605 - -
Aed10g0992 605 Gene3D alpha/beta hydrolase 15 247 IPR029058 -
Aed10g0992 605 PANTHER PROTEIN EDS1-RELATED 1 605 IPR044214 GO:0006952
Aed10g0992 605 Coils Coil 307 327 - -
Aed10g0992 605 Coils Coil 380 400 - -
Aed10g0992 605 SUPERFAMILY alpha/beta-Hydrolases 30 199 IPR029058 -
Aed10g0992 605 CDD Lipase_3 51 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0992 Aed-Chr10 8702282 8706297 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0992 66 186 Acyl Lipid Metabolism Gene Families AT5G14930 30.081 3.50e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0992 K18875 - gmx:100778851 951.044
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0992 10 8702282 8706297 Aed10g0992 10 8702282 8706297 ECH