Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0943 ATGGCTACTCAATCCCCTTCACCTCCAAACACAGTTGATTCATTGGATCTCTTTCTCATGGTGTATGTAGGTGGTGAAGTTGCGCAACTGGAAAATGTGGGTCAGCAAAGTAGTGGAGAAGAAGAGCTTGGTAAACAGAGTTCAGACACATCGGTGTTTGTGAACTCAGAGCTGATGCGTGAGGAGCAAATTCAGAATGCGGTGAAATTTCTATCGCACCCGAAGGTTAGAGGTTCTCCTGTCATCCACAGGCGGTCATTTCTGGAGAAGAAGGGCCTTACAAAGGAGGAGATTGATGAAGCCTTTCAGCGTGTTCCTGTAGGCTTGTTGTTTGATATGTTACTCAATTTTCTAGATATTGTGTATATACGAATGCAACCAGATTCACCTCCAAGTGTGCAGACAGCTGGTGTAAATCAAGGTGAAAACTGGAATTACTCATTCAGTTACATTAACTCGTGGCTCACTGTAATACTCACAGATGGACAATTGAAGCCATCACCAAACATTCAGCAGCAAGGTCAACCACAAGCTTTGCAGCCAACTGTACCAGCTTCTACTGGTGTTACTACTACACTGGGAACCTTGTCACGCCGCAGTTTTCACTGGTCGCATGCCCTTATTGCAGTTGGATTACTAGCTGCTTCAGGTGCTGGTACAGTTATTGTAATTAAGAATTCTATTCTCCCTCGATTAAAATCCTGGATACGTAATGTTGTCCTAGAAGAGGATCATGACCAATTAAAGAGAACAGGCTCAAAACCAACATTGGCAGAAGAAGCTGCACAGGCTGCAAAAGCAGCTGCAATTGCAGCTGCTGATATCGCAAAAGCAAGCCAAGAACTACTTACTTCAAAAATTGAAGAGAAGAGATATTTTGTACAAGTTGTGAGCCTTTTGGATATGCAAGTGCAGGAGATGAAGTTGATGACTAATGCAATAAGAAGATTGGAAGCTTCTGGAGGACTCTCTGTCTCAAAGAAAGAAGATCGCCTAGTCACTCAAGCAGGTTCAAAGACACAGCAACTGATCGTGAATGGGAAGTCAGACTATGAGTCCCAATCAGTGAGATCTTCATCCCCTCCTGCATCTGTTGAACCATCTAGTGCTCCTCATCCAAAATCATACATGGAGATAATGGCCATGATCCAAAGAGGGGAGAAGCCTTCTAACATTCGAGAAATTGATGATTCACCCCCCAACCCTTATCAGCAACCATCAAATCCTCGTATAGCGCCTAGAGCTAAGCCTTGGGAGGTTAGTCAGGTGCAAAACACCTCAACCCAAGTCCTTCCTTATCAAGTAAACGGCAAGGTCCAAGACAATGGTGACAACTCAGGTCCTTGGTGGCAAACAAAGAACGTCAAAATCAAAGAGATCGATAACGAAATTGAGTATAACGGAGCACCTGCTGCATCCAGTCAGCCGCCAGTCCAACGATCGTGGGTTCCCCCTCAACCTCCTCCCATAGCAATGCCGGAGGCTGCAGAAGCAATCAGACGCCCAAAGCAGGTAGTCCAAAAGGAAGTGACGATGGATGATCAGTCAGTAGCTAATTCTTCAGACCTCTCTAATGGATCCAAATCCGAAGATGCAATAGAAAGCAACGACGGCAACTCACTTGTCAGCTCCAGTGAGATCCAAAATCATGAAGTCAGTTACGAAGAGAAGTGA 1674 0.4492 MATQSPSPPNTVDSLDLFLMVYVGGEVAQLENVGQQSSGEEELGKQSSDTSVFVNSELMREEQIQNAVKFLSHPKVRGSPVIHRRSFLEKKGLTKEEIDEAFQRVPVGLLFDMLLNFLDIVYIRMQPDSPPSVQTAGVNQGENWNYSFSYINSWLTVILTDGQLKPSPNIQQQGQPQALQPTVPASTGVTTTLGTLSRRSFHWSHALIAVGLLAASGAGTVIVIKNSILPRLKSWIRNVVLEEDHDQLKRTGSKPTLAEEAAQAAKAAAIAAADIAKASQELLTSKIEEKRYFVQVVSLLDMQVQEMKLMTNAIRRLEASGGLSVSKKEDRLVTQAGSKTQQLIVNGKSDYESQSVRSSSPPASVEPSSAPHPKSYMEIMAMIQRGEKPSNIREIDDSPPNPYQQPSNPRIAPRAKPWEVSQVQNTSTQVLPYQVNGKVQDNGDNSGPWWQTKNVKIKEIDNEIEYNGAPAASSQPPVQRSWVPPQPPPIAMPEAAEAIRRPKQVVQKEVTMDDQSVANSSDLSNGSKSEDAIESNDGNSLVSSSEIQNHEVSYEEK 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0943 557 Pfam Pex14 N-terminal domain 60 104 IPR006785 -
Aed10g0943 557 MobiDBLite consensus disorder prediction 326 372 - -
Aed10g0943 557 MobiDBLite consensus disorder prediction 509 549 - -
Aed10g0943 557 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE 40 106 - -
Aed10g0943 557 MobiDBLite consensus disorder prediction 468 557 - -
Aed10g0943 557 MobiDBLite consensus disorder prediction 391 412 - -
Aed10g0943 557 MobiDBLite consensus disorder prediction 335 365 - -
Aed10g0943 557 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 161 536 IPR025655 GO:0005515|GO:0005778|GO:0016560
Aed10g0943 557 Pfam Family of unknown function (DUF5572) 371 420 - -
Aed10g0943 557 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 40 106 IPR025655 GO:0005515|GO:0005778|GO:0016560
Aed10g0943 557 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE 161 536 - -
Aed10g0943 557 Gene3D - 50 108 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0943 Aed-Chr10 8069591 8074830 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0943 K13343 - gmx:100807229 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1460 6 18914290 18919645 Aed10g0943 10 8069591 8074830 PCT