Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0938 ATGGCTGCTTCTGTGCAAAACGAACACCAACAACACCAACGAGTTATTGGAATCATCGAAGAAGATAAATTGCTGAAACAGAAAGAAGAAGGGACTGAGGGAAACAACAACAACAACATGGCTCCCACGGCAGGCAATTCGATCCACCGATCGGGTTCGAGGCCTCAACTTGATGTCAGCAAAGCCGAGATTCAAGGGAACGTGGAGGAGAAGTATCCCACCATTCTGTTGCCCAATCAATCTGATGATTTGTCTCATCTTGCTCTTGACATTGGAGACCAATCAGCTGATGATAAAAGGAAGAGAAGTGTGACGGAGCGATTGGGGCTTTCTAATGGTAACAGGAGAAGCTACCCTATTCTTGGTGGAAGGCTTCACTTTGTGAAGTTTGAAACCAGAAAGATTAATGAGTGCTTGGATTTCATTCATTCAAAGCAGCTTCACTGTGGTGGGTTGGAGTCACATTACTCTGATGGTGTGACTGACCAGAATGCCATAATTAAGGCTACTGGAGGTGGACCATACAAGTATGCTGACCTTTTCAAAGAAAGACTTGGGGTCAGTCTTGACAAAGAAGATGAAATGGATTGTCTTGTGGCAGGAGCAAATTTCTTGCTTAAGGCAATTCGTCACGAAGCTTTCACTCACATGGAGGGCCACAAAGAGTTTGTTCAAATTGAACCTAATGATTTATTCCCGTATCTTCTGGTTAATATTGGATCTGGTGTTAGTATGATCAAGGTTGATGGGGATGGAAAATTTGAGAGGGTTAGTGGGACAAATGTTGGTGGTGGTACTTATTGGGGCTTGGGAAGACTGTTAACAAAGTGCAAGAGTTTTGATGAGTTGCTTGAGCTGAGTCAGAAAGGAGATAATAGAACTATGGACATGCTAGTTGGGGACATTTACGGGGGTTTGGACTATTCTAAGATTGGCCTATCAGCTTCCACTATTGCTTCAAGTTTTGGCAAAACAATATCAGAAAAAAAGGAACTTGAAGAGTACAGACCTGAAGATATATCACTTTCTCTTCTACGAATGATTTCATACAATATTGGCCAGATAGCTTATTTGAACGCATTGCGATTTCGGTTGAAGCGAATCTTTTTTGGAGGATTTTTTATAAGGGGTCATGCCTATACCATGGACACTATTTCTTTTGCTGTGCATTTCTGGTCCAATGGGGAAGCACAAGCAATGTTCTTGCGACATGAAGGATTTCTGGGAGCTTTAGGTGCATTTATGAGTTATGAGAAACATGGTTTAGATGACCTCATGGTGCATCAGTTGGTGGAAAGGTTTCCAATGGGTGCTCCATATGCAGGCGGCAAGATTCATGGCCCACCACTTGGAGATTTAAATGAGAAGGCAAAGTTTTCAATGCAGATTTCGTGGATGGAGAAGTTTTTGCAGAAGGGAACCGAGATTACTGCACCTGTGCCAATGACTCCAGTTTCTGGAACTACTGGGCTTGGGGGTTTTGAAGTTCCTTTATCAAAAGGAAGTACTCTGCGATCTGATGCAAGTGCTCTAAATGTTGGTGTTCTCCATCTAGTACCAACGTTGGAGGTGTTTCCATTACTAGCAGACCCAAAATTGTATGAGCCCAATACGATTGATCTATCGGATCATAGTGAATTAGAATATTGGCTCACCATTTTATCAGAGCACTTACCAGATCTTGTGGACAAGGCTGTAGCAAGTGAAGGTGGAACTGATGATGCAAAAAGAAGGGGTGATGCTTTTGCTCGTGCATTTTCAGCTCACCTGACAAGGTTGATGGAAGAGCCTTCTGCATATGGGAAGTTAGGCCTCGCCAATCTCTTGGAAATGAGGGAAGAGTGCTTGAGAGAATTTCAGTTTGTTGATGCCTATAGAAGTATAAAGCAGAGGGAAAATGAGGCATCGCTTGCTGTTTTACCTGACTTGTTAATGGAACTTGATAGCATGGATGAGGAATCAAGGATGCTTACACTGATTGAAGGTGTTCTTGCGGCAAATATTTTTGACTGGGGATCTCGTGCATGTGTGGATCTCTATCACAAAGGAACTATTATTGAAATTTATAGAATGAGTCGCAATAAAATGCGCAGACCTTGGCGGGTGGATGATTTTGATCTCTTCAAAGAGAGGATGCTAGGGACTGGGGACAAGAAAATGCCCCGTCATAAGAGAGCTTTACTTTTCGTAGACAACTCAGGGGCTGACATTGTTCTCGGGATGCTTCCACTGGCTAGGGAGCTCCTCCGCCGTGGAACTGAAGTAGTTCTTGTTGCAAACTCACTTCCTGCCTTAAATGATGTCACTGCAATGGAGCTTCCTGATATTGTAGCTGAGGCTGCTAAGCATTGTGATGTACTAAGGCGAGCTGCCGAAGCTGGAGGCTTGCTTGTGGATGCAATGATTAATACTTCAGACAGCTCTAAGGAAAAATCATCTTCAGTTCCCTTGATGGTTGTTGAGAACGGCTGTGGTAGTCCATGTATAGACTTAAGACAGGTCAGCTCTGAGTTAGCTGCTGCAGCAAAAGATGCTGATCTGATAATTTTGGAAGGGATGGGAAGATCACTTCATACTAACCTCAATGCTCGGTTCAAGCGTGATGCTTTAAAGCTTGCAATGGTGAAGAACCAGAGACTGGCTGAGAAATTGGTTAAAGGAAACATATACGATTGTATTTGCAAATACGAGCCTGCTAGTTGA 2703 0.4325 MAASVQNEHQQHQRVIGIIEEDKLLKQKEEGTEGNNNNNMAPTAGNSIHRSGSRPQLDVSKAEIQGNVEEKYPTILLPNQSDDLSHLALDIGDQSADDKRKRSVTERLGLSNGNRRSYPILGGRLHFVKFETRKINECLDFIHSKQLHCGGLESHYSDGVTDQNAIIKATGGGPYKYADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGHKEFVQIEPNDLFPYLLVNIGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNRTMDMLVGDIYGGLDYSKIGLSASTIASSFGKTISEKKELEEYRPEDISLSLLRMISYNIGQIAYLNALRFRLKRIFFGGFFIRGHAYTMDTISFAVHFWSNGEAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYAGGKIHGPPLGDLNEKAKFSMQISWMEKFLQKGTEITAPVPMTPVSGTTGLGGFEVPLSKGSTLRSDASALNVGVLHLVPTLEVFPLLADPKLYEPNTIDLSDHSELEYWLTILSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLTRLMEEPSAYGKLGLANLLEMREECLREFQFVDAYRSIKQRENEASLAVLPDLLMELDSMDEESRMLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMRRPWRVDDFDLFKERMLGTGDKKMPRHKRALLFVDNSGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTAMELPDIVAEAAKHCDVLRRAAEAGGLLVDAMINTSDSSKEKSSSVPLMVVENGCGSPCIDLRQVSSELAAAAKDADLIILEGMGRSLHTNLNARFKRDALKLAMVKNQRLAEKLVKGNIYDCICKYEPAS 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0938 900 MobiDBLite consensus disorder prediction 26 58 - -
Aed10g0938 900 Pfam Fumble 117 415 IPR004567 GO:0004594|GO:0005524|GO:0015937
Aed10g0938 900 Pfam Damage-control phosphatase ARMT1-like domain 607 886 IPR002791 -
Aed10g0938 900 PANTHER PANTOTHENATE KINASE 22 822 IPR004567 GO:0004594|GO:0005524|GO:0015937
Aed10g0938 900 PANTHER PANTOTHENATE KINASE 2 22 822 - -
Aed10g0938 900 TIGRFAM panK_eukar: pantothenate kinase 123 416 IPR004567 GO:0004594|GO:0005524|GO:0015937
Aed10g0938 900 SUPERFAMILY Actin-like ATPase domain 85 212 IPR043129 -
Aed10g0938 900 SUPERFAMILY Actin-like ATPase domain 184 417 IPR043129 -
Aed10g0938 900 Gene3D - 537 622 IPR035073 -
Aed10g0938 900 SUPERFAMILY AF1104-like 516 898 IPR036075 -
Aed10g0938 900 Gene3D - 294 406 - -
Aed10g0938 900 Gene3D - 78 225 - -
Aed10g0938 900 MobiDBLite consensus disorder prediction 31 58 - -
Aed10g0938 900 PIRSF PanK_long 40 900 IPR015844 GO:0004594|GO:0015937
Aed10g0938 900 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 702 898 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0938 Aed-Chr10 7955968 7967679 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0938 K24265 - gmx:100781580 1642.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0938 10 7955968 7967679 Aed6g1455 6 18861610 18874285 ECH
Aed10g0938 10 7955968 7967679 Aed10g0938 10 7955968 7967679 ECH
Aed6g1455 6 18861610 18874285 Aed10g0938 10 7955968 7967679 PCT