Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0929 ATGAATAATGCGCGAGGCGAGGTTGGTTCGCCGGATCCGTTGGATTCGTTCCCTCCGTTACGAATTCGGGGATCGGACGGTGCCTCGGACGATTCCGAGTTCGAGCGGTATTGCAGCGCCAACTCGGTGATGGGGACGCCCAGCACCAGCATGAGTCTCTGCAGCGCCGTTACGCTCTTCCACGATTTCTCCGATTGCGATTTCGCTTCGTCCGCCGAGGGTTTCGAGAATTTCAGTTTGGGAAAAGGAGCCGCGGAGGCGAATCGCGGCGGCAGCGACCGGAGGAGGAGGAGTTTGCGGTACGGTTCCACTGGATTGGAGCTGTACGGTGATTGCGGCGACGAGCTCGCTATGACGGCGCTCGATTCGTCGGAGGTGTTCGGGTTTGATAATCGGATCGAAGAGTCGAAAGGGAACGGTGAAGTGAGTGGTGGAAATGGTTTTATTGAGAAAAGAGAAGAAGAAGAAGAGGAGGAAGAGGAAGAAGAAGAAGAAGAGGAGGAGGAAGAGGAAGAAGAAGAAGAGTTTTCGGAGGGAGATGATTCTATGTATGACTATGGTAGTGATGGTGATGGTGGAAATAAAACGTATTTGTCAAAAAACATAGGTTATTATGAGGTGCCGGAAGTGAGAAATGAGAACTCTTTGTTTATGAACTCTTCCGTGGCGTTTGGATCGCGAGACCTCGATGATTTTTTGTTGCAGAGTGGTGATATTTCTGTCATGTCTGATCTGTTTCACAGTCAGCGGAAAAAGAATGATGGAGTGAATAGGGGTTCTGGTCGAAAGGAGGAAGGGAAAGATGAAAAGGATGTTGTCATAGTTGATGAAGTTGAAGAAACTAAAGATATTGGGCATTCTGATTCTGCTCAAGAGATTAAGGAAAGGGAAGTTGATTGTATGAGAAGTGTCGAATCGCAGGTCCAAGGTTCTGATGATTTGGTTAATTGTCCTGAGACTTCTTCTGTTGCCAAGGTGGATGAGGTTGGTTTGGATCTGCTGGTGAAAGAAGCTCCGAGGAATTTGGGTTTGGATGTTACTGATGGTGGTAGCATGGAAAAGGGGAATGTAGACAGTGAAGAAGCAGTTGCTGCTAGCGATGCACATGGTGTAAAGTCGGAGCCTGATGATTCTAAGTTCAAGCTTGATCGCCTTAGTGATAGCCAATTTGATAAAAGTTCGTCCAATCCATCCAACCATCGTGGGAATGTTAGTGCAAAATCTTTTGAGAGTCTTGAGCAAATTGAGCCAGTGTTGGACGACAGAATGAGGAAAACATTAGAGAAGTCTTCCACTTCAACAAATCTCTTGGAAAAAAGTCCTGTGGTATCTAAGACAGAAGACTTTGAGTTAAATGGATTCTATGATGAGGTTGTTCAGGAAATGGAAGAAATTTTACTGGAATCTATGGATTCTCCTGGGGCTAGGCTTTCCATGCGTAACAGATTGACTGAGCCTCAATTTTCTATGCCTTCAAGAGATGGTGGGTTGACTGCTTCTACTTCTAGTACAGATGATGCTTACCTGCTAGTTCAGCGCCCAAGAAAAATAGATAGGATTGAAGTGGTAGGTGCAAGGCAGAAGAAGGGGGATGTTTCTTTCAGTGAAAGATTGGTTGGAGTGAAGGAATACACTGTGTATAAAATAAAAGTGTGGAGTGGCAAGGATCAGTGGGAGGTTGAAAAGCGATATCGCGATTTCCTCACTCTCTGTCGGTGCATGAAAACCTTATTCAATGAGCAAGGCTGGAAATTACCTTTTCCATGGTCTTCTGTTGAAAAGGAAACCCAGATATTTAGAAGTGCATCTCCTGATATTATTGTGAAGAGAAGTGTTCTCATTCAAGAGTGTTTACAGTCTATCATCCATTCCAGGTTTTCTTCAAGTCCTCCTAGAGCATTGATTTGGTTTTTATCCCATCAAGATTCATATCCTATTTCACCTGTGTCAGATGCACATGAACCAGTGTCTCAGTCTTCTTTTACAATAGGGGAAAATATCCGAAATATTTCCAATTTAGGAAAGACAATTTCACTTATAGTTGAAATTCCACCAAACAAATCTGTGAAACAGTTGTTAGAAGCACAACATCACACCTGTGCTGGATGCCATAAGCATTTTGATGATGGAAGAACTTTGATTTGGGATTTTGTACAGACATTTGGATGGGGGAAGCCTCGACTTTGTGAATACACAGGCCAGTTGTTTTGCTCTACTTGCCACACAAATGAGACTGCAGTCTTGCCAGCCAGGGTTTTACAGAATTGGGATTTCACTCACTATCCTGTTTCTCAGATGGCAAAATCCTATCTGGATTCTATATATGAACAGCCCATGCTTTGTGTCACTGCCGTTAATCCCTTCCTTTTGTCAAAGGTCCCAGCCTTGCTTCATATTATGAGTGTCAGAAAAAAGTTAGGTACAATGCTTCCATATGTTCGCTGCCCATTTCGGAGGTCTATCAACAGAGGACTTGGAAACAGAAGATATCTTCTTGAAAGCAATGACTTTTTTGCTCTTAGAGATTTGATTGATCTTTCCAGAGGAGTCTTTGCTGCACTTCCTGTGATGGTGGAAACTGTGTCGAGGAAAATCCTGGAACACATTACTGACCAATGTCTTATATGCTGTGATGTGGGAGACCCCTGCAATGCCCGACAAGATTGCAGTGACCCATCTTCACTCATTTTCCCATTTCAGGAAGCCGATATCGAAAGGTGCAAAGCTTGTCAGTTGGTGTTCCACAAGCGTTGCTTTAAAAAACTTTCAAACTGTCCCTGTGGGGCTCAACTCAGATTGAATGAGACAAGAGCATGGAGCTTAACTAACAGAGCAAGCCAGAGAGGAGGTGACGGCAGCGAAACAAGAGGAGCTTTGGACTTGTTAGGCAGGGGACTGAGTTCCGGGTTGTCACCTGGGTTCCTCTCTGGATTATTTACCAAAGTAAAGCCAGAGAAAACTAGAGAGCAGCATAAAGATGAAAATATTATTTTGATGGGTTCCTTACCAAGCACTTCTTTATGA 3024 0.4418 MNNARGEVGSPDPLDSFPPLRIRGSDGASDDSEFERYCSANSVMGTPSTSMSLCSAVTLFHDFSDCDFASSAEGFENFSLGKGAAEANRGGSDRRRRSLRYGSTGLELYGDCGDELAMTALDSSEVFGFDNRIEESKGNGEVSGGNGFIEKREEEEEEEEEEEEEEEEEEEEEEEFSEGDDSMYDYGSDGDGGNKTYLSKNIGYYEVPEVRNENSLFMNSSVAFGSRDLDDFLLQSGDISVMSDLFHSQRKKNDGVNRGSGRKEEGKDEKDVVIVDEVEETKDIGHSDSAQEIKEREVDCMRSVESQVQGSDDLVNCPETSSVAKVDEVGLDLLVKEAPRNLGLDVTDGGSMEKGNVDSEEAVAASDAHGVKSEPDDSKFKLDRLSDSQFDKSSSNPSNHRGNVSAKSFESLEQIEPVLDDRMRKTLEKSSTSTNLLEKSPVVSKTEDFELNGFYDEVVQEMEEILLESMDSPGARLSMRNRLTEPQFSMPSRDGGLTASTSSTDDAYLLVQRPRKIDRIEVVGARQKKGDVSFSERLVGVKEYTVYKIKVWSGKDQWEVEKRYRDFLTLCRCMKTLFNEQGWKLPFPWSSVEKETQIFRSASPDIIVKRSVLIQECLQSIIHSRFSSSPPRALIWFLSHQDSYPISPVSDAHEPVSQSSFTIGENIRNISNLGKTISLIVEIPPNKSVKQLLEAQHHTCAGCHKHFDDGRTLIWDFVQTFGWGKPRLCEYTGQLFCSTCHTNETAVLPARVLQNWDFTHYPVSQMAKSYLDSIYEQPMLCVTAVNPFLLSKVPALLHIMSVRKKLGTMLPYVRCPFRRSINRGLGNRRYLLESNDFFALRDLIDLSRGVFAALPVMVETVSRKILEHITDQCLICCDVGDPCNARQDCSDPSSLIFPFQEADIERCKACQLVFHKRCFKKLSNCPCGAQLRLNETRAWSLTNRASQRGGDGSETRGALDLLGRGLSSGLSPGFLSGLFTKVKPEKTREQHKDENIILMGSLPSTSL 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0929 1007 MobiDBLite consensus disorder prediction 365 388 - -
Aed10g0929 1007 MobiDBLite consensus disorder prediction 152 185 - -
Aed10g0929 1007 PANTHER DIFFERENTIALLY EXPRESSED IN FDCP 8 HOMOLOG 44 1007 - -
Aed10g0929 1007 MobiDBLite consensus disorder prediction 134 198 - -
Aed10g0929 1007 MobiDBLite consensus disorder prediction 389 409 - -
Aed10g0929 1007 CDD PX_domain 532 631 - -
Aed10g0929 1007 MobiDBLite consensus disorder prediction 247 271 - -
Aed10g0929 1007 MobiDBLite consensus disorder prediction 1 33 - -
Aed10g0929 1007 Pfam Putative zinc-RING and/or ribbon 727 930 IPR025258 -
Aed10g0929 1007 ProSiteProfiles PX domain profile. 525 644 IPR001683 GO:0035091
Aed10g0929 1007 Gene3D - 532 643 IPR036871 GO:0035091
Aed10g0929 1007 MobiDBLite consensus disorder prediction 342 409 - -
Aed10g0929 1007 PANTHER PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN 44 1007 - -
Aed10g0929 1007 Coils Coil 145 180 - -
Aed10g0929 1007 SMART DUF4206_2 727 934 IPR025258 -
Aed10g0929 1007 SUPERFAMILY PX domain 537 642 IPR036871 GO:0035091
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0929 - - gmx:100800081 1625.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0929 10 7838506 7844644 Aed10g0929 10 7838506 7844644 ECH