Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0920 ATGTATATGTTAGATAAAAAAAGAATCAACAAAATTGAGGCTGCTTTTATATTTCTCTTGAATTTATCATCCATCATCTTCGGAACTCATTCACTCACTCATTCATCTCACCCCAACAACAACCTCTCTGATCGTTCCGCATTCCCCTTTTCTGTTTTTTTCTTTCACGTTATAGGGATAAATATGGGCCCTGCAGAAATTGTGGATTTATCTAGTGATGATGAAAGTGAAAAGGTTAGTTTCAAAGCTGTTAAGTTGGAGGAAGATTTTGTTATGGATGCAAAGCAATATAATGGGACTAACAAAGGTCAGCTAGCCAAACATAAGCGACCCCTAAGTTGTACTACTCGGCAGGATTCTGAAGAAAATTTAAGTTCTAATGGTCCAAGTACAGGTCATAGTAACTCCAGTGTATTGGAGCAGGGACCGTCGCCAGTTGATGACACAGGAATTTCTTATGCATCATCCATTGGTGTAGCACCCCTGTGTAGGCAGTTTTGGAAAGCTGGAAACTACGATGACGGGCTTGGTTCGAAAGTCACAGTCCAAAATGCTAAAAATTATCTACATGTGCACCCCATGTTCCTTCACTCAAATGCAACTTCGCATAAGTGGGCATTTGGTGCCATAGCAGAGCTTCTTGATAATGCAGTTGATGAGATCCAAAATGGGGCTACCTTTGTCATTGTAGATAAAACATCAAATCCAAGGGATGGAAGTCCAGCATTGTTGATTCAAGATGATGGTGGTGGAATGGATCCAGAAGCAATGCGCCGTTGCATGAGTTTTGGATTTTCAGATAAGAAGTCACAGTTTGCTATTGGACGGTATGGAAATGGCTTCAAGACCAGTAGTATGAGGCTTGGTGCAGATGTCATAGTCTTTAGTTGCCATCTAAATAATAGGATTTTGACTCAAAGCATTGGACTTCTGTCATATACGTATTTGATACAAACACAGCTTGACAGAATAGTAGTGCCCATGGTGAATTATGAGTTTAATACTACAACTGGATCGTTGAAAATATTAAATGGCAATGATCATTTTGTGTCGAATTTATCCTTGCTGTTGCGTTGGTCACCGTATTCATCAGAAGCAGATCTTCTGAAACAATTTGATGACATTGGATCTCATGGTACTAAAGTCATTATCTACAATTTGTGGTGCAATGATGATGGGAGTTTGGAGCTAGACTTTGATAGAGATCCTACGGATATTCGTATTTCTGGGGATGTCAAGCAGATTGATACACTTAAAGCTTGGAAAAGTGTAAATGAGGAGCACATTGCTAATCGGCTTCGTTACTCTTTACATGCATATATGTCCATATTGTACTTGAAGTTACCAGAAAGTTTTCAAATTATATTGCGAGGGCAAGTTGTGAAGCCACACAATATTGCTGATGATCTTAAATATCCTCAATTTGTTAAATATGCACCACTAATTGGTGGATCCATAAAGGGAACAGCTTTGACAATCACAACAATTGGATTTCTTAAGGAAGCTCCTCAAGTCAATATCCATGGTTTCAATGTATATCACAAAAATCGGCTTATACTGCCATTTTGGCAGGTTGTAAGCTATTTGGACAGTAGGGGAAGAGGAGTTGTTGGAATCCTGCAAGCAGATTTTATTGAGCCAACTCATAACAAACAAGATTTTGAGAGAACTTCCTTGTTTCAAAAGCTTGAAGGGCGATTGAAGGAGATGACATGGGAATACTGGGATACACATTGTACATTGTTTGGGTATAAGGATAAGTACAAGAGGAAGCCGCTTCCACCTGGGGTTACATCAATGCAGAAACCACTTTCTATAGAAAAACCGGTCATGCTGAACAAAAGTTGCTCCCCTGTTGTCAATACAAAAGCAGAATATGGGAATTCTAAACAGTGTTCCACAAAACTGCAAATAAGATCCGAGCAAGGTTCTCATAATAAGAGGAAGACACATGAACTGGTAGACCTAGAGATTATAGAAAAGCATGCAAGGACAGAGAATGTAACCTGTGTTGGTTTCAGTCAGAATAACCAGATCATTACAACTCCAGCTGACCAGGTGTTAGACCGAAAGACTATGCACTTGGTGCAACAAAACAAGAAACTGCACGCAAAATGTTCAGAATTTGAAAAGACAGGAGAAGAACTTAATCTCAAGGTGACGACACTCAAAAGTAAACTACAAGAAGCCCAAGATGAGTATAAACGGCTTTTGGTTGAAGTGAAGTCCCTAGACCTAAAAGCAGAGTAG 2250 0.3938 MYMLDKKRINKIEAAFIFLLNLSSIIFGTHSLTHSSHPNNNLSDRSAFPFSVFFFHVIGINMGPAEIVDLSSDDESEKVSFKAVKLEEDFVMDAKQYNGTNKGQLAKHKRPLSCTTRQDSEENLSSNGPSTGHSNSSVLEQGPSPVDDTGISYASSIGVAPLCRQFWKAGNYDDGLGSKVTVQNAKNYLHVHPMFLHSNATSHKWAFGAIAELLDNAVDEIQNGATFVIVDKTSNPRDGSPALLIQDDGGGMDPEAMRRCMSFGFSDKKSQFAIGRYGNGFKTSSMRLGADVIVFSCHLNNRILTQSIGLLSYTYLIQTQLDRIVVPMVNYEFNTTTGSLKILNGNDHFVSNLSLLLRWSPYSSEADLLKQFDDIGSHGTKVIIYNLWCNDDGSLELDFDRDPTDIRISGDVKQIDTLKAWKSVNEEHIANRLRYSLHAYMSILYLKLPESFQIILRGQVVKPHNIADDLKYPQFVKYAPLIGGSIKGTALTITTIGFLKEAPQVNIHGFNVYHKNRLILPFWQVVSYLDSRGRGVVGILQADFIEPTHNKQDFERTSLFQKLEGRLKEMTWEYWDTHCTLFGYKDKYKRKPLPPGVTSMQKPLSIEKPVMLNKSCSPVVNTKAEYGNSKQCSTKLQIRSEQGSHNKRKTHELVDLEIIEKHARTENVTCVGFSQNNQIITTPADQVLDRKTMHLVQQNKKLHAKCSEFEKTGEELNLKVTTLKSKLQEAQDEYKRLLVEVKSLDLKAE 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0920 749 Pfam Morc6 ribosomal protein S5 domain 2-like 435 575 IPR041006 -
Aed10g0920 749 PANTHER HISTIDINE KINASE-, DNA GYRASE B-, AND HSP90-LIKE ATPASE FAMILY PROTEIN 61 745 - -
Aed10g0920 749 Coils Coil 713 747 - -
Aed10g0920 749 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 208 302 - -
Aed10g0920 749 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 61 745 IPR045261 GO:0016887
Aed10g0920 749 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 206 407 IPR036890 -
Aed10g0920 749 MobiDBLite consensus disorder prediction 117 145 - -
Aed10g0920 749 MobiDBLite consensus disorder prediction 101 145 - -
Aed10g0920 749 Gene3D - 183 387 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0920 Aed-Chr10 7747683 7766352 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0920 - - gmx:100795667 1297.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0920 10 7747683 7766352 Aed6g1442 6 18771113 18779350 ECH
Aed10g0920 10 7747683 7766352 Aed10g0920 10 7747683 7766352 ECH