Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0919 ATGTGCCGTTTCATTCTACTACTGACCATAGTGTGCACTTTTGTTGTTGATGTTGCAACTCTAGGAGACAACACAAACACAACAGATTCCTACTGGCTTCTAAGAATTAAATCAGAACTGGTTGATCCATTTGGAGCCTTGAGAAACTGGTCTCCAACAACTCATAAAAATATTTGTAGCTGGAATGGACTAACATGTGCACTTGATCAGAATCAGAATCAGACACATGTTGTTGTAGTAGGCCTTAATTTGTCTGGCTCAGGAATATCAGGTTCCATTCCAGGTGATTTCAGCCACCTCATTTCTCTTCAAACACTTGATTTGTCTTCAAACTCCCTCACAGGCCCAATCCCTTCTGAAATTGGACAGCTTCAAAATCTAACAACACTTCTTCTTTACTCAAACTATCTCTCTGGTGTCATTCCTAAAGAGATAGGTAGTTTGAGCAAGTTGCAAGTTCTTAGACTTGGAGATAACTTGTTGGAAGGTGAAATCACTCCTAGTATTGGCAACTTGAGTGAGTTGACAGTGTTAGGTGTAGCCAACTGCAACTTAAGTGGAAGCTTACCTGCTGAGGTTGGTAACTTGAAGCATCTTGTGTCTCTTGATTTACAAATGAACAGTCTCAGTGGCCTCATACCTCAAGAGATTCAAGGCTGTGGACAGCTTCAAAATTTTGCAGCATCAAACAACAAGCTTGAAGGAGAAATACCCTCCTCTTTAGGGTCTCTCGGTTCATTGAGAATTCTGAACCTGGCCAATAACACTCTTTCTGGATCAATTCCTTCCTCTTTGAGTCTTCTCTCCAAATTGACATACCTGAATTTGCTTGGAAACAAGTTAAATGGCGAGATTCCTTCAGAGCTTAACAGCTTGAGCCAGCTACAGAAGCTTGACTTATCAAAAAACAACCTTTCTGGATCACTAACCCTTCTTAATGTCAAGTTACTGAATCTTGAAACTATGGTTCTGTCTGATAATGCTTTAACAGGTAGTGTTCCATATAGCTTCTGCCTTAGAGGTTCAAAACTTCAGCAACTGTTCTTGGCTAGGAATCAGCTATCTCGAAGATTTCCCTTGGAGCTACTCAACTGCTCCTCAATCCAACAAGTGGACCTTTCTGATAACAGTTTTGAAGGTGAACTTCCATCAAGCCTTGACAAACTACAGAACCTCACAGATCTCATGCTCAACAACAACAGCTTCAGTGGATCTCTACCTCCAGGAATTGGAAACATTAGTAGCTTGAGAAGCCTTTACTTGTTTGGCAACTTTTTCACAGGAAAAATCCCAGTGGAGATTGGAAGGCTTAAGAGGCTGAACACCATTTACCTCTATGATAACCAGATGTCTGGACCTATACCAAGAGAGTTAACAAACTGCACAAGCTTAACTGGAATTGATTTCTTTGGAAACCATTTTTCTGGGACCATTCCAGAGACTATAGGTAAGCTAAAGGACTTAACTGTTCTCCATTTAAGGCAAAATGACCTTTCAGGACCAATCCCACCAAGCATGGGGTACTGTAAAAGGCTTCAGTTATTGGCATTAGCAGATAACAAGTTGTCAGGTTCCATACCCTCCACATTCAGTTACCTTTCACAAATTAGCACCATTACCCTTTACAACAACTCCTTTGAAGGACCACTACCTCATTCCCTCTCTCTTCTCAGAAACCTTAAAATCATAAACTTTTCCAATAACAAGTTCGGTGGAAGTATCTTTCCTCTGACTGGTTCAACTTCTCTCACTGTTTTGGACTTGACAAACAACAGCTTCTCAGGTTCCATCCCTTCTATTCTAGCCAACTCCAGAGGCCTCACCCGTCTCAGGCTTGGAAACAACTATCTCACAGGAACCATTCCTTCTGAACTCGGCCGCCTGGCTGAGCTAAACTTCCTTGATTTATCATTCAACAACTTGACAGGACATGTGCCACCACCACTCTCAAACTGCAAGAAAATTGAACACCTTCTACTGAACAATAACAGATTGAGTGGCGAAATGTCGCCATGGCTGGGAAGCTTGCAAGAACTTGGTGAGCTAGATCTCTCATTCAACAACTTTCATGGAAAGGTACCTGCTGAGCTTGGTGGCTGCTCAAAGTTGCTTAAGCTCTCTCTCCATCACAACAATCTCTCTGGTGAAATCCCTCAAGAGATTGGAAACCTTACTTCACTCAATGTCTTCAACTTGCAAAGGAATAGTCTCTATGGCATCATTCCATCAACGATTCAGCAATGCACTAAGCTCTATGAGCTAAGGCTCTCACAGAACTTCCTCTCAGGTACTATACCAGTTGAACTAGGAGGGGTCACTGAGTTGCAAGTCATATTGGACTTGAGTAGGAACCACTTTTCTGGTGAGATTCCATCGTCTCTTGGAAATCTCATGAAGCTAGAAAGACTTGATCTTTCTTTTAACCATCTTCAAGGACAAGTTCCTCCTTCACTTGGTCAACTCACAAGCCTGCATGTGCTGAATCTCTCAAATAACCATCTTCATGGCCTAATTCCTTCAACCTTTTCAGGGTTCCCGTTAAGTTCTTTTCTGAACAATGATCATTTGTGTGGCCCTCCACTAGCATTGTGCTCCGAAGCTACCGGGAAGGAGCGAATGCAGCTGTCAAATGAACAAGTAGCAGCAATCATAGTAGCCATTGTCCTTACTTCCACCCTGATATGCTTAGTATTGTTGTATATAATGTTGAGAATCTGGTGCAACTGGATGAAGGTAGCTGTTGTTTCAAGTGAAGATGGTGGCATGGTTGAGCAAAAGACAAGAAATGGAGAGTACTGGAATATGAATTCCCCTGAGTTGTTGTTTTCTTCACCAGATAAACAAATTTCACCAACAATTTGCATTTGCAGTCTCAAAATTGATGCAGAAGCCCGGGAAAATACCTTGGTCAGTTAA 2916 0.4187 MCRFILLLTIVCTFVVDVATLGDNTNTTDSYWLLRIKSELVDPFGALRNWSPTTHKNICSWNGLTCALDQNQNQTHVVVVGLNLSGSGISGSIPGDFSHLISLQTLDLSSNSLTGPIPSEIGQLQNLTTLLLYSNYLSGVIPKEIGSLSKLQVLRLGDNLLEGEITPSIGNLSELTVLGVANCNLSGSLPAEVGNLKHLVSLDLQMNSLSGLIPQEIQGCGQLQNFAASNNKLEGEIPSSLGSLGSLRILNLANNTLSGSIPSSLSLLSKLTYLNLLGNKLNGEIPSELNSLSQLQKLDLSKNNLSGSLTLLNVKLLNLETMVLSDNALTGSVPYSFCLRGSKLQQLFLARNQLSRRFPLELLNCSSIQQVDLSDNSFEGELPSSLDKLQNLTDLMLNNNSFSGSLPPGIGNISSLRSLYLFGNFFTGKIPVEIGRLKRLNTIYLYDNQMSGPIPRELTNCTSLTGIDFFGNHFSGTIPETIGKLKDLTVLHLRQNDLSGPIPPSMGYCKRLQLLALADNKLSGSIPSTFSYLSQISTITLYNNSFEGPLPHSLSLLRNLKIINFSNNKFGGSIFPLTGSTSLTVLDLTNNSFSGSIPSILANSRGLTRLRLGNNYLTGTIPSELGRLAELNFLDLSFNNLTGHVPPPLSNCKKIEHLLLNNNRLSGEMSPWLGSLQELGELDLSFNNFHGKVPAELGGCSKLLKLSLHHNNLSGEIPQEIGNLTSLNVFNLQRNSLYGIIPSTIQQCTKLYELRLSQNFLSGTIPVELGGVTELQVILDLSRNHFSGEIPSSLGNLMKLERLDLSFNHLQGQVPPSLGQLTSLHVLNLSNNHLHGLIPSTFSGFPLSSFLNNDHLCGPPLALCSEATGKERMQLSNEQVAAIIVAIVLTSTLICLVLLYIMLRIWCNWMKVAVVSSEDGGMVEQKTRNGEYWNMNSPELLFSSPDKQISPTICICSLKIDAEARENTLVS 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0919 971 SUPERFAMILY L domain-like 669 857 - -
Aed10g0919 971 ProSiteProfiles Leucine-rich repeat profile. 823 844 IPR001611 GO:0005515
Aed10g0919 971 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 428 668 - -
Aed10g0919 971 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 673 842 - -
Aed10g0919 971 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 523 720 - -
Aed10g0919 971 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 7 309 - -
Aed10g0919 971 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 801 864 - -
Aed10g0919 971 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 315 530 - -
Aed10g0919 971 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 618 806 - -
Aed10g0919 971 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 211 336 - -
Aed10g0919 971 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Aed10g0919 971 Gene3D Ribonuclease Inhibitor 26 183 IPR032675 -
Aed10g0919 971 ProSiteProfiles Leucine-rich repeat profile. 246 268 IPR001611 GO:0005515
Aed10g0919 971 SUPERFAMILY RNI-like 371 714 - -
Aed10g0919 971 Pfam Leucine Rich Repeat 799 819 IPR001611 GO:0005515
Aed10g0919 971 Pfam Leucine Rich Repeat 823 845 IPR001611 GO:0005515
Aed10g0919 971 Pfam Leucine Rich Repeat 102 122 IPR001611 GO:0005515
Aed10g0919 971 Gene3D Ribonuclease Inhibitor 533 873 IPR032675 -
Aed10g0919 971 Pfam Leucine rich repeat 582 641 IPR001611 GO:0005515
Aed10g0919 971 SMART LRR_typ_2 628 652 IPR003591 -
Aed10g0919 971 SMART LRR_typ_2 821 844 IPR003591 -
Aed10g0919 971 SMART LRR_typ_2 389 413 IPR003591 -
Aed10g0919 971 SMART LRR_typ_2 797 820 IPR003591 -
Aed10g0919 971 SMART LRR_typ_2 100 124 IPR003591 -
Aed10g0919 971 SMART LRR_typ_2 244 268 IPR003591 -
Aed10g0919 971 SMART LRR_typ_2 485 509 IPR003591 -
Aed10g0919 971 SMART LRR_typ_2 724 747 IPR003591 -
Aed10g0919 971 SMART LRR_typ_2 292 315 IPR003591 -
Aed10g0919 971 SMART LRR_typ_2 148 172 IPR003591 -
Aed10g0919 971 SMART LRR_typ_2 316 339 IPR003591 -
Aed10g0919 971 SMART LRR_typ_2 676 700 IPR003591 -
Aed10g0919 971 SMART LRR_typ_2 196 219 IPR003591 -
Aed10g0919 971 SUPERFAMILY L domain-like 26 334 - -
Aed10g0919 971 PRINTS Leucine-rich repeat signature 821 834 - -
Aed10g0919 971 PRINTS Leucine-rich repeat signature 295 308 - -
Aed10g0919 971 Gene3D Ribonuclease Inhibitor 245 313 IPR032675 -
Aed10g0919 971 Gene3D Ribonuclease Inhibitor 184 244 IPR032675 -
Aed10g0919 971 Gene3D Ribonuclease Inhibitor 314 532 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0919 Aed-Chr10 7735357 7738272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0919 169 865 Receptor kinase-like Gene Family AT5G46330 32.603 2.78e-101 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0919 - - gmx:100802757 1589.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0919 10 7735357 7738272 Aed10g0919 10 7735357 7738272 ECH