Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0911 ATGGCGTCAATTTGCGACACCGATATTCCGCTCCGGCTTCAGAACACCGACGCTTTCGCCGCTTCTTACAGAAACTCTCTCCAATCGCTCCGAGCCACCGCACTCGAAACCGCGCGATCTCAATCTGAACTAGCAGAGGCTAAAGGTAAACTGAGAGAAGCTGAGGATGAATTGGTAAAGGCACTTGCAGTTAAGACTCGTAGAGAGGCGAAGCGAATGGCGTTGAAAGATGCTATTGGTTCTGTGAAGGGAAGAATTGAAGATGTGAAGACGAGTATTCAGAAGCAGAGAACCAAAAACGAGGAATGTGCCACCGTTGTATCGCAACACCGTCTTGTTTTGGAAGCGTCTGAACAGAAATCAAATGAAAGCAATGAGCATAGAGATGGAGTTCAGGAGGCCATATCTTGGTACAATAGGATCCTTGGTTTTCATGTTGAAGGTGGACATGGGGTAAAATTCACCTTCAAGAATATTAATGTGGACAACCCAAATGAGGAGTTCTTTTTTACCATCCGTCATGAAAATGACATGTATACATTTCTAAATTGTAAACCATCTGTCAAAGATACTGACGAGTTGATCCATGAATTAAACAAGACAAATGGGTTATTTAAATTTGTCAGAACAATGAGGAAAAAGTTTCAAGAAGCAGTTGCACAAGGCAGTCTATCTATGACAAGAAATGAACATCAAGAATCTGGCTTTATCTCTGCATCTGGTCCAGTTTTATCAGTATCAACCATTACTGAAGGAAATGAGCATCAAAATGAACCCACCAAAGGTAATATACATTTCCAGAAACAAGTCAATCGGAGAAGGGTAAAATCAGCAATTCTATCTCCAGGATCTGCATCATCTGTTCGTCAATCTCCTCGTTTGAAGATATATGAAAAAAAACAGAGGGTCTTTGCCAACCTTAAGAATCTGGATAGCTCGTACAATATGACTGGTCAGGAAATGAAGCGGTGTGAGGGATGCATGTCACCTCATTTTGATAAGATGTGCTGA 1011 0.4164 MASICDTDIPLRLQNTDAFAASYRNSLQSLRATALETARSQSELAEAKGKLREAEDELVKALAVKTRREAKRMALKDAIGSVKGRIEDVKTSIQKQRTKNEECATVVSQHRLVLEASEQKSNESNEHRDGVQEAISWYNRILGFHVEGGHGVKFTFKNINVDNPNEEFFFTIRHENDMYTFLNCKPSVKDTDELIHELNKTNGLFKFVRTMRKKFQEAVAQGSLSMTRNEHQESGFISASGPVLSVSTITEGNEHQNEPTKGNIHFQKQVNRRRVKSAILSPGSASSVRQSPRLKIYEKKQRVFANLKNLDSSYNMTGQEMKRCEGCMSPHFDKMC 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0911 336 PANTHER - 5 296 - -
Aed10g0911 336 Pfam Chromosome segregation protein Spc25 148 216 IPR013255 GO:0007059|GO:0031262
Aed10g0911 336 Gene3D Chromosome segregation protein Spc25 122 223 - -
Aed10g0911 336 Coils Coil 37 64 - -
Aed10g0911 336 PANTHER KINETOCHORE PROTEIN SPC25-RELATED 5 296 IPR045143 GO:0007059|GO:0031262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0911 Aed-Chr10 7674454 7678848 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0911 K11550 - gmx:100804876 514.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0911 10 7674454 7678848 Aed10g0911 10 7674454 7678848 ECH
Aed6g1430 6 18699975 18703850 Aed10g0911 10 7674454 7678848 PCT