Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0906 ATGCAAGAAGCCTTTGCTCAACTGCAAAGGTCCACTCTCAACACACTTTATATGAGTGGCAGGTGTACATCCCAGGAAAGCACTTCTGTTCAGTATAACCTACTTGCTTCCCTTCCACACACACACATCTTCGTTCTTTCTCTGTATATGGCTAAGCTTCCTACTATGTTGTTCTCTTTGAAGCACTTCTTGGTGCTGTCCCTCGCCTTGAACGTCAGCCTCATACTCAGATCATTCATGATGCACCACCAAGTTGCTCAAGAACCTCACAGTCACAGTAGTAGTACTAAAACAGAGGGGAAGCATAAAATCATCCACAAATCTCGCATGCTGGTTATACCATCATCCAATAGAGTCATCAACCTCGACCATGGAGACCCGAGGATGTATGAGAGGTTTTGGCGACAAACGGGTGACAAGAGCACGATAACAATCCCGGGGTGGCAGTCTATGAGTTATTTTTCTGATGTGACCAACATTTGCTGGTTTTTAGAGACAGATTTTGCGACCGAAGTAGCGAGGCTTCACAGAGTGGTGGGCAATGCAGTCACTGAAGGGCGTCACATTGTTGTTGGAACTGGTTCTTCTCAGCTCTTTCTCGCTGCTCTCTATGCTCTCTCCCCAACTCATGCTCCTGAACCAATCAGTGTTGTATGTGCCTCACCCTACTACTCGTCGTACCCATCAATGACGGATCACTTGAAATCAGGGTTATACAAATGGGGTGGTGATGCAGAAAGTTATGAGAAAGAGGGTCCCTACATAGAGCTGGTAACTTCACCCAATAATCCTGATGGACACGTAAGAAGGTCAAAGGTCAACAGAAGCCAGGGATTTTTGGTCCATGACCTTGCCTATTACTGGCCACAGTACACCCCTATATCAGCCCCTGCAGATCACGATCTCACGCTTTTCACTGTCTCTAAAAGTACTGGCCATGCAGGAATGCGCATAGGGTGGGCTCTTGTGAAAGACCAAGAGGTAGCAAAGAAAATGACTAAATTCATAGAGCTGAATACAATTGGAGTGTCTAAGGATTCGCAACTCAGAGCTGCTAAGGTTTTAAGGGCAGTTTCTGATAGCTGGGAACAAGGAAACTCCCAAGAGGGAGAATCATTCTTCAAATTCAGCCACAAACTCATGGCCAACAGGTGGAAACAACTGAGACTAGTTGTGGAGCGTAGAGAGTTGTTCAGTTTGCCCAATTTTTCTCCTGCATTCTGCACCTTTTTCAATCAGGTCTTGGAGCCTCAACCAGCTTTTGTGTGGTTAAAGTGTGAGGGAAACGTGGAGGACTGCGAAAGCTTCCTTAGAGGACACAACATCTTAACCAGAAGTGGAACACACTTTGGGGTTAGCCCAAAATACGTAAGAATTAGCATGTTGGACACTGACGATAATTTTAACCAGTTTCTAAATAGACTATCTGTCATACAGTCACAATAG 1446 0.4537 MQEAFAQLQRSTLNTLYMSGRCTSQESTSVQYNLLASLPHTHIFVLSLYMAKLPTMLFSLKHFLVLSLALNVSLILRSFMMHHQVAQEPHSHSSSTKTEGKHKIIHKSRMLVIPSSNRVINLDHGDPRMYERFWRQTGDKSTITIPGWQSMSYFSDVTNICWFLETDFATEVARLHRVVGNAVTEGRHIVVGTGSSQLFLAALYALSPTHAPEPISVVCASPYYSSYPSMTDHLKSGLYKWGGDAESYEKEGPYIELVTSPNNPDGHVRRSKVNRSQGFLVHDLAYYWPQYTPISAPADHDLTLFTVSKSTGHAGMRIGWALVKDQEVAKKMTKFIELNTIGVSKDSQLRAAKVLRAVSDSWEQGNSQEGESFFKFSHKLMANRWKQLRLVVERRELFSLPNFSPAFCTFFNQVLEPQPAFVWLKCEGNVEDCESFLRGHNILTRSGTHFGVSPKYVRISMLDTDDNFNQFLNRLSVIQSQ 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0906 481 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 53 480 - -
Aed10g0906 481 Gene3D - 92 160 IPR037029 GO:0016846
Aed10g0906 481 Gene3D Aspartate Aminotransferase, domain 1 364 481 IPR015422 GO:0003824
Aed10g0906 481 Pfam Allinase 120 478 IPR006948 GO:0016846
Aed10g0906 481 CDD AAT_like 171 475 - -
Aed10g0906 481 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 53 480 - -
Aed10g0906 481 Gene3D - 165 363 IPR015421 GO:0003824
Aed10g0906 481 SUPERFAMILY PLP-dependent transferases 118 476 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0906 Aed-Chr10 7614005 7621606 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0906 K16903 - gmx:100807013 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0906 10 7614005 7621606 Aed10g0906 10 7614005 7621606 ECH
Aed6g1425 6 18662874 18664043 Aed10g0906 10 7614005 7621606 PCT