Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0888 ATGGAAATTCCAGAATCTCTTAGATTCAATGGACACGTGATGGCCATGCCATATCCGAGTCGAGGACACGTGAACTGCATGATGAGCCTATGCAAACTACTCGCAGCATCATCTTCAACTTCTCTCATCATCACTGTTGTGGTCACGGAAGAGTGGCTCGGCTTCATCGGCTCCGAGCCGGAGCCGAGCAACGTACGCTTCGCCACCGTCCCCAACGTTATCCCTCTCCAATCTCAGATAGCCTCTGATATCACTGGTTTCTTCGAAGCCGTCGTAACCAACATGGAACCTCCCTTCGACCAACTCCTCCGCCGCCTTCACCCTCCCGTCACCGCCCTAGTCGCCGACGCTGAGCTTCACTTTCCGGTCGCCGTCGCCCGCCGCTGGAAGGTTCCGGTGGCGCTGCTTTGGACCATGTCGGCTTCCTTTTACCTAACGTTGCATCGACTTGGAAGCTTGGTTCGTAACCAGTCTTTGAAGGTTGATCTTCTAGGTAAGGTTTTATTGTTGGTGGCTTTCAATGGTATAGATGATTATGAACAGCAGCAGCATATAGCAGGAATTTCTGCGGCACAATTAGCTGATCTTCGAACAGTGCTTCGTGAAAATGACTTGAGGTTTATGAAGCTTGAGTTGGAATGCATTTCAGTAGTGCCAAAAGCAGATTGTCTTGTAGTTAATACTGTTCAAGAGTTGGAAGCTGAAGTAATTGATTCTTTGAGAGCCACGTTCCACTTTCCAATTTGTCCCATTGCCTTTCCTTACATCAAACACGAAACAAGCCATTTAGTGACCAACAGTGATGACTTAAATTGGCTAGATTCTCAGCCAGCCATGTCAGTGTTGTACATTTCTCTCGGTAGTTTCCTTTCTGTGTCTTGTGCCCAAATGAATGAAATTGTTTCAGCTTTAAACACGAGTGGTGTTTGTTACTTGTGGGTGGTTCGTGGAGAGGTTTCATGGTTAAGAGAGAAATGTGGGGATAGGGGTTTAGTGGTGCCTTGGTGTGACCAATTGAAGGTTTTGTCACATCCTTCTGTAGGTGGGTTTTGGAGCCATTGTGGGTGGAATTCCACTCTAGAAGCTGTTTTTGCTGGTGTTCCAATGCTGACATTTCCTCTTTTCTTAGACCAAGTCCCAAATAGTAGGCAAATTTTGGAAGAGTGGAAGAATGGGTGGGAGTTAAAAAGATCAGATTTGGGAAGTGCAGAGTTAATAACACAAGAAGAAATAGTGGAAGTGATTAGAGAGTTTATGGATCATGGAAGTAGGAAGGGTAGAGAAATCCGAGACAGGGCCCTAGAACTTAAGAGCGTGTGTGACCAAGCAGTTGCAGATGGTGGATCTTCCAATCTGAACCTTGATGCATTTATAAAAGATGTTTTGTGTGTTCAAGGTCATTGA 1404 0.4601 MEIPESLRFNGHVMAMPYPSRGHVNCMMSLCKLLAASSSTSLIITVVVTEEWLGFIGSEPEPSNVRFATVPNVIPLQSQIASDITGFFEAVVTNMEPPFDQLLRRLHPPVTALVADAELHFPVAVARRWKVPVALLWTMSASFYLTLHRLGSLVRNQSLKVDLLGKVLLLVAFNGIDDYEQQQHIAGISAAQLADLRTVLRENDLRFMKLELECISVVPKADCLVVNTVQELEAEVIDSLRATFHFPICPIAFPYIKHETSHLVTNSDDLNWLDSQPAMSVLYISLGSFLSVSCAQMNEIVSALNTSGVCYLWVVRGEVSWLREKCGDRGLVVPWCDQLKVLSHPSVGGFWSHCGWNSTLEAVFAGVPMLTFPLFLDQVPNSRQILEEWKNGWELKRSDLGSAELITQEEIVEVIREFMDHGSRKGREIRDRALELKSVCDQAVADGGSSNLNLDAFIKDVLCVQGH 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0888 467 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 272 408 IPR002213 GO:0008194
Aed10g0888 467 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 11 461 - -
Aed10g0888 467 CDD GT1_Gtf-like 12 439 IPR002213 GO:0008194
Aed10g0888 467 Gene3D Glycogen Phosphorylase B; 259 442 - -
Aed10g0888 467 PANTHER UDP-GLYCOSYLTRANSFERASE 87A1-LIKE 8 461 - -
Aed10g0888 467 Gene3D Glycogen Phosphorylase B; 16 454 - -
Aed10g0888 467 PANTHER GLYCOSYLTRANSFERASE 8 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0888 Aed-Chr10 7439370 7441284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0888 12 461 Glycosyltransferase AT2G30140 43.450 4.11e-119 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0888 - - vun:114196047 669.848