Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0868 ATGACGATCACGGCGGCGCCCACGGTGAAGGACGAGTGCCTTACGGTGAGGGGCAGGGCGGTTTTGACCAATGTCCCCGGAAACATTCTTGTTTCTCCACTTGGAACAGAGTCCGCTTTCCTGGGCGCAACTTCAACCGTTTCAAGTTCGCGCCATGTTTTCAATCTTGGCATTCTTCAGGGATATAAGTTGGTATCTTTGTTCAGAGTGAAAATCTGGTGGATGATACCGCGTATAGGGAGATCTGCTAGTGATATTCCAATGGAAACCCAATTGCTTCTCCTTGAAGCAAGAGAAGAGTCTTCCCATGAGGATGAGTTTTTTTCTTTTGACTCTGTTGAGCCAACCACAGAGACCACTTGCTACATTCTCTTCTTGCCTGTTCTGGATGGACAGTTTCGCGCAACTTTGCAGGGAACTCAATCCAATGAGCTCCAATTCTGCATTGAAAGTGGAGATGCCCATGTTCAAACTTCCCAATCACTAGAAGCAGTATTTGTGAATTCAGGGGACAATCCATTTGAGTTAATCAGGGAATCCATCAATTTTTCAAATGGAGGTTGTTCGCCAAAATTTATCATCATTGATGATGGATGGCAAGAGACCCTCAACACGTTTCACAAAGAAGGTGAACCAGTGATTGAGGGAACTCAGTTTGCAACCAGACTGATAGACATTAAAGAAAACAAAAAGTTCACCAATGCAGGCTCCAACAATTCTTGTAACAATCTCCACGATTTCATTGATTCCATCAAACAGAATATGAATGTAAAATACGTTTACATGTGGCATGCTATAGCTGGTTATTGGGGAGGTGTACTACCATCATCAGATTCAATGAAGAAGTATAATTCAAAGATTGTATATCCAATTCAGTCACCTGGTACCACAGGCAACCTTAGAGACATAGCCATGGACAGCTTGGAAAAATATGGAGTGGGAATCATTGATCCACTAAATCTACTTGACTTTTACAATGACTACCACAGTTACCTTGCTAGTTGTGGTGTGGATGGAGTCAAAGTAGATGTCCAAAACTTGATAGAAACGTTGGGTTCTGGCTACGGTGGACGTGTTTCGCTGACCAAACTGCATCAAGAAGCACTAGAGCAATCTGTAACCAGGAACTTTAACTACAACAATCTCATTTGTTGCATGTGTCACAACTCTGATTCAATTTACAGTGACAAGCCTGGCAATCATGATTTTAAAATCCTCAAGAAGCTGGTGCTGCCTGATGGATCAGTCTTGAGAGCAAGATATGCCGGCCGTCCTACTCGAGATTGTTTGTTTGAAGATCCGTCTGCTGAAAATTTGGAATCTGAATGCTCTGACTGGGGTGGTAGGCGTCTTCAATTGCCAAGGAGCAGGAAGCTGGCCACTGAAATCATTGGAAGCTGCACCCTCACGTGTAACCATTTCAGGGAGAGCTTGCTTTCCAAGGTGCCTTACAAAGGAAAACTAGAAGTGTCTTTGGAAACTCTCCAATGTGAAATATATACTGTATCTCCAATAAGGGTGTTTGGTCATGATGTGCAATTTGCACCAATAGGATTGCTTGACATGTACAATTCAGGAGGAGCAGTAGAAGCCTTGGACTGCACCATGGATGATGTTGCACAATGCATAATAAAAATCAAAGGCAGAGGATGTGGTCGTTTTGGAGCATACTCCAACGTTAGACCGAAACTGTGTGTAGTGGACATGAAGGTGGAGGAGTTCTCCTACAACCCTGAAGATGGATTGTTGACTATTACACTTGGTGGTGAAGGCAATTCAAGGGACATAGAACTTGTATACTGA 1803 0.4337 MTITAAPTVKDECLTVRGRAVLTNVPGNILVSPLGTESAFLGATSTVSSSRHVFNLGILQGYKLVSLFRVKIWWMIPRIGRSASDIPMETQLLLLEAREESSHEDEFFSFDSVEPTTETTCYILFLPVLDGQFRATLQGTQSNELQFCIESGDAHVQTSQSLEAVFVNSGDNPFELIRESINFSNGGCSPKFIIIDDGWQETLNTFHKEGEPVIEGTQFATRLIDIKENKKFTNAGSNNSCNNLHDFIDSIKQNMNVKYVYMWHAIAGYWGGVLPSSDSMKKYNSKIVYPIQSPGTTGNLRDIAMDSLEKYGVGIIDPLNLLDFYNDYHSYLASCGVDGVKVDVQNLIETLGSGYGGRVSLTKLHQEALEQSVTRNFNYNNLICCMCHNSDSIYSDKPGNHDFKILKKLVLPDGSVLRARYAGRPTRDCLFEDPSAENLESECSDWGGRRLQLPRSRKLATEIIGSCTLTCNHFRESLLSKVPYKGKLEVSLETLQCEIYTVSPIRVFGHDVQFAPIGLLDMYNSGGAVEALDCTMDDVAQCIIKIKGRGCGRFGAYSNVRPKLCVVDMKVEEFSYNPEDGLLTITLGGEGNSRDIELVY 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0868 600 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 183 395 - -
Aed10g0868 600 PANTHER - 472 600 IPR008811 -
Aed10g0868 600 PANTHER - 183 395 IPR008811 -
Aed10g0868 600 PANTHER - 1 183 IPR008811 -
Aed10g0868 600 PANTHER - 395 436 IPR008811 -
Aed10g0868 600 SUPERFAMILY (Trans)glycosidases 187 396 IPR017853 -
Aed10g0868 600 Pfam Raffinose synthase or seed imbibition protein Sip1 9 182 IPR008811 -
Aed10g0868 600 Pfam Raffinose synthase or seed imbibition protein Sip1 481 586 IPR008811 -
Aed10g0868 600 Pfam Raffinose synthase or seed imbibition protein Sip1 183 395 IPR008811 -
Aed10g0868 600 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 395 436 - -
Aed10g0868 600 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 183 - -
Aed10g0868 600 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 472 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0868 Aed-Chr10 7264349 7273854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0868 1 439 Glycoside Hydrolase AT3G57520 39.216 7.90e-135 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0868 - - qsu:112006142 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0868 10 7264349 7273854 Aed10g0868 10 7264349 7273854 ECH