Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0859 ATGGCTACGAGTGGAAGCGATGAGGGGCAGAACAAGAACAACCCTGCCCTTGACCCGGATCTGGATACTCCGGATAACCCGGATCACGAGTTCGCTGAGTTCGGATCGGGTTGCTTCTGGGGTGCTGAGTTGGCCTTTCAGCGAGTTGTGGGTGTGGTGAAGACTGAGGTTGGTTACACTCAGGGTCACACCCCGGATCCGGATTACAAACTGATTTGCACCGGAACCACTAACCACGTTGAAGTGGTTCGGGTCCAGTTCGACCCGAAGGTTTGCCCCTACACTGATCTTCTCGCTCTCTTTTGGTCTCGACATGATCCCACTTCCATCAACCGCCAGGGCAATGATGTGGGTGCACAGTATAGATCAGGAATATACTACTACAACGAGACACAGAATCGTTTAGCCCAGGAATCAAAAGATGCAAAACAGTTGGAATTGAAGGAGAAGAAGATTGTGACAGAAATACTTCCACCTAAGAGGTTTTACAAAGCAGAGGAGTACCATCAACAGTATCTGGAGAAGGGTGGTGGCCAAGGCAACAAACAATCTGCACAAAAAGGCTGCACTGATCCCATCAGATGCTATGGCTGA 594 0.5 MATSGSDEGQNKNNPALDPDLDTPDNPDHEFAEFGSGCFWGAELAFQRVVGVVKTEVGYTQGHTPDPDYKLICTGTTNHVEVVRVQFDPKVCPYTDLLALFWSRHDPTSINRQGNDVGAQYRSGIYYYNETQNRLAQESKDAKQLELKEKKIVTEILPPKRFYKAEEYHQQYLEKGGGQGNKQSAQKGCTDPIRCYG 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0859 197 Gene3D Peptide methionine sulphoxide reductase MsrA 18 197 IPR036509 GO:0008113
Aed10g0859 197 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 10 197 - -
Aed10g0859 197 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 29 187 IPR002569 GO:0008113
Aed10g0859 197 Coils Coil 128 148 - -
Aed10g0859 197 SUPERFAMILY Peptide methionine sulfoxide reductase 25 178 IPR036509 GO:0008113
Aed10g0859 197 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE FAMILY PROTEIN 10 197 - -
Aed10g0859 197 TIGRFAM msrA: peptide-methionine (S)-S-oxide reductase 31 175 IPR002569 GO:0008113
Aed10g0859 197 MobiDBLite consensus disorder prediction 1 17 - -
Aed10g0859 197 MobiDBLite consensus disorder prediction 1 28 - -
Aed10g0859 197 Pfam Peptide methionine sulfoxide reductase 33 176 IPR002569 GO:0008113
Aed10g0859 197 MobiDBLite consensus disorder prediction 174 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0859 Aed-Chr10 7195957 7198063 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0859 K07304 - gmx:100527085 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0859 10 7195957 7198063 Aed10g0859 10 7195957 7198063 ECH