Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0851 ATGCGAAACCTAACTAACACAGAAGAAATGGCGGAGAAGTTGGGAGCAGCAGAAGAGAGCTCCAATTCGAAGGCTTTTCATCATACGACGACGAAGCTCGTCGTTTTGGCTGACCTCAACATCGATCCTCCCGAAGCCGAAGACGACGATTCTTCCCTCGTCCCTCCTCCACCAATCACCATCATTGAAGGTGAAAGTAAAAAGTTGAACAAACTGAGCAAATCCCGCTCCAGAAAGACAGATTCTTCTCTTGATTGTGTAGCTGATGTGGATGGTGATCAACATGTTCAAGGGCCTCCTTCATCTCGGGAGGAAAAAGTTAGCAGTGTGAAGACTGGCTTGGTACATGTTTCAAGGAAGATGCCGAAAAATGCTCACGCTCATTTTATACTCGGCTTGATGTACCAACGATTAAGCCAACCTCAAAAGTTTGCTCACTGTTCATTGAAATGTCTTCAGGCTGTGTTGGCTTATGAGAAGGCAGAAGAGATCTTGCTCAGGCCTGAGGCTGAGATTGACAGGCCAGAGTTGCTTTCTTTTGTTCAGATTCACCATGCACAGTGCCTGATACTAGAAAGTTCATCAGAAAATAGTTCAGATAAAGAACTTGAACCTCATGAAGTTGAAGAGATTCTTTCTAAGCTAAAAGAGTCAGTGAAGTCAGATATCAGACAGACAGCTGTATGGAACACACTGGGTTTTATTCTTCTTAAAACTGGTCGTGTGCAGAGTGCTATCTCAGTTTTGTCATCATTGTTGTCCATTGCACCAGAGAATTATGATTGCCTAGGAAATCTTGGAACAGCTTATCTTCAAATTGGGAATTTGGAATTATCTGCAAAATGTTTCCAAGAATTGATTTTAAAAGATCAAAGCCATCCTGCAGCTTTGGTCAATTATGCTGCTCTTCTTTTGTGTAAATATGCTTCTGTTGTAGCAGGTCCTGGTGCAAGTGCTTCTGAAGGTGCCGTGGCTGATCAGATCATGGCTGCTAATGTTGCTAAGGAATGTTTGTTGGCTGCAGTTAAAGCAGATAGCAAATCAGCCCATGTCTGGGCAAATCTTGCCTATGCATTTTCTATTAGTGGTGATCATCGAAGTTCCAGCAAGTGCTTGGAGAAGGCAGCTAAACTGGAACCCAATTGCATGTCTACTCGATATGCTGTTGCTATCCATCGAATAAAGGAGGCAGAAAGATCTCAAGATCCTAGTGAAATGCTTTCGTGTGCTGGAAATGAGATGGCTTCTATAATAAGAGACAGTGATTCATCCCTGGTTGAGATTCCAATAGCATGGTCCGGGCTTGCCATGGTTCACAAGGCTCAGCATGAGATAGCATCAGCATATGAAAGTGAACAGAATGGACTGAGAGAAGTTGAAGAGCGTGCAGTTTGCAGTTTAAAGCAGGCTATAGCAGAAGATCCAAATGATGCTGTGCAGTGGCACCAACTTGGTGTCCATAGTCTGATTGCTCGGCAATTCAAAACATCACAAAAGTACCTCAAAGCTGCTGTTGCCTGCGACAAGGATTGCAGCTATGCATGGTCTAACCTAGGTGTCTCACTTCAACTATCAGAAGAACCTTCACAGGCTGAAGAAGTATACAAGCAAGCATTGTCTTTGGCAACAAATCAACAAGCGCATGCTATATTATCCAACTTGGGAATTCTCTATCGCCATCAGAAACAATATCAACGTGCGAAGGCTATGTTTACAAAATCACTTGAACTACAGCCTGGGTATGCTCCTGCATTCAACAATCTGGGTCTTGTGTTTGTTGCTGAGGGTCTTTTGGAAGAGGCCAAGTATTGTTTTGACAAAGCCATCCAATCAGATCCATTGCTGGATGCTGCCAAGTCTAATTTGATTAAGGTGGTTGCCATGTCAAAGTTATGCAAAGGCCTCTCCTCATGCGCTCTTAAAGAATGA 1929 0.4339 MRNLTNTEEMAEKLGAAEESSNSKAFHHTTTKLVVLADLNIDPPEAEDDDSSLVPPPPITIIEGESKKLNKLSKSRSRKTDSSLDCVADVDGDQHVQGPPSSREEKVSSVKTGLVHVSRKMPKNAHAHFILGLMYQRLSQPQKFAHCSLKCLQAVLAYEKAEEILLRPEAEIDRPELLSFVQIHHAQCLILESSSENSSDKELEPHEVEEILSKLKESVKSDIRQTAVWNTLGFILLKTGRVQSAISVLSSLLSIAPENYDCLGNLGTAYLQIGNLELSAKCFQELILKDQSHPAALVNYAALLLCKYASVVAGPGASASEGAVADQIMAANVAKECLLAAVKADSKSAHVWANLAYAFSISGDHRSSSKCLEKAAKLEPNCMSTRYAVAIHRIKEAERSQDPSEMLSCAGNEMASIIRDSDSSLVEIPIAWSGLAMVHKAQHEIASAYESEQNGLREVEERAVCSLKQAIAEDPNDAVQWHQLGVHSLIARQFKTSQKYLKAAVACDKDCSYAWSNLGVSLQLSEEPSQAEEVYKQALSLATNQQAHAILSNLGILYRHQKQYQRAKAMFTKSLELQPGYAPAFNNLGLVFVAEGLLEEAKYCFDKAIQSDPLLDAAKSNLIKVVAMSKLCKGLSSCALKE 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0851 642 ProSiteProfiles TPR repeat profile. 512 545 IPR019734 GO:0005515
Aed10g0851 642 ProSiteProfiles TPR repeat profile. 226 259 IPR019734 GO:0005515
Aed10g0851 642 SMART tpr_5 478 511 IPR019734 GO:0005515
Aed10g0851 642 SMART tpr_5 512 545 IPR019734 GO:0005515
Aed10g0851 642 SMART tpr_5 429 462 IPR019734 GO:0005515
Aed10g0851 642 SMART tpr_5 548 581 IPR019734 GO:0005515
Aed10g0851 642 SMART tpr_5 349 382 IPR019734 GO:0005515
Aed10g0851 642 SMART tpr_5 226 259 IPR019734 GO:0005515
Aed10g0851 642 SMART tpr_5 582 615 IPR019734 GO:0005515
Aed10g0851 642 SMART tpr_5 260 293 IPR019734 GO:0005515
Aed10g0851 642 ProSiteProfiles TPR repeat profile. 349 382 IPR019734 GO:0005515
Aed10g0851 642 SUPERFAMILY TPR-like 120 385 IPR011990 GO:0005515
Aed10g0851 642 MobiDBLite consensus disorder prediction 67 88 - -
Aed10g0851 642 MobiDBLite consensus disorder prediction 41 110 - -
Aed10g0851 642 MobiDBLite consensus disorder prediction 1 28 - -
Aed10g0851 642 ProSiteProfiles TPR repeat profile. 548 581 IPR019734 GO:0005515
Aed10g0851 642 Pfam Tetratricopeptide repeat 236 295 - -
Aed10g0851 642 Gene3D Tetratricopeptide repeat domain 547 635 IPR011990 GO:0005515
Aed10g0851 642 Pfam Tetratricopeptide repeat 514 578 - -
Aed10g0851 642 Gene3D Tetratricopeptide repeat domain 317 417 IPR011990 GO:0005515
Aed10g0851 642 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 17 639 - -
Aed10g0851 642 SUPERFAMILY TPR-like 461 613 IPR011990 GO:0005515
Aed10g0851 642 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN 17 639 - -
Aed10g0851 642 Gene3D Tetratricopeptide repeat domain 461 546 IPR011990 GO:0005515
Aed10g0851 642 ProSiteProfiles TPR repeat profile. 582 615 IPR019734 GO:0005515
Aed10g0851 642 Pfam Tetratricopeptide repeat 582 613 IPR019734 GO:0005515
Aed10g0851 642 Pfam Tetratricopeptide repeat 349 382 IPR019734 GO:0005515
Aed10g0851 642 Gene3D Tetratricopeptide repeat domain 113 308 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0851 463 614 Glycosyltransferase AT3G04240 26.144 1.78e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0851 - - gmx:100820184 1123.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0851 10 7136562 7141680 Aed10g0851 10 7136562 7141680 ECH