Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0849 ATGAAGCGGTTTTTCAAAGTGGTGGAGAAAGATTCAGATGGGTCAGTGAAGAAGGCAAGGGAGAATGAGAATGACGCTGTCGCTGAGGCCAAAGACGAAGAGAAGAAGAAGGAGCCGTTGAAGTTCATGACTTGGAATGCCAACAGTTTTCTCCTTCGAGTCAAAAACAACTGGCCCCACTTCACCAACCTCATCACCTCTTCTGATCCTGATATCATTGCCATACAGGAAGTGCGGATGCCTGCTGCTGGAGCCAAGGGTGCGTCTAAAATTCAGGGAGAAATTAAAGATGATACAAACGCAGCCAGGGAAGAAAAGAAGATATTGATGCGTGCACTTTCTGCTCCACCTTTTGGAAACTATCATGTTTGGTGGTCTCTTGCAGACTCTAAGTATGCAGGCACTGCACTACTGGTGAAAAAATGCTTCAAGCCAAAAAGTGTTGTTTTTAATCTTGATAAAATAGCTTCAAAGCATGAACCAGATGGTCGAGTAATCCTAGTTGAATTCGAAACACTTCGTTTATTGAATACGTATGTACCAAACAATGGATGGAAAGAGGAGGCAAACTCATTTCAAAGGAGAAGAAAATGGGACAAAAGAATTCTGGAATTTGTTACACAAAATTCAGACAAGCCTTTAATATGGTGTGGGGATCTGAATGTCAGCCATGAAGAGATCGATGTGAGTCATCCAGAGTTTTTCAGTACAGCAAAACAGAACAATTATACTCCTCCAAACAAAGAGGATTGTGGGCAGCCTGGTTTTACCCTTGCTGAAAGAAGACGGTTTGGTACCATCTTAAGAGAGGGAAAGCTGGTGGATGCCTACAGATTTCTGCATGAGGACAAGGACATGGAGCGAGGTTTCTCATGGTCTGGAAACCCAGTTGGAAGGTATCGTGGAAAACGGATGCGAATAGACTACTTTTTAGTTGCAGAGAAACTTAAAGAAAGGATTGTTGCATGTGAAATGCATGGACATGGGATAGAGTTAGAAGGTTTTTATGGAAGTGATCATTGTCCAGTTACCTTGGAGCTCTCTCCTAGCTCTAACTCTCAAAATGAGGATCCAATATAA 1080 0.425 MKRFFKVVEKDSDGSVKKARENENDAVAEAKDEEKKKEPLKFMTWNANSFLLRVKNNWPHFTNLITSSDPDIIAIQEVRMPAAGAKGASKIQGEIKDDTNAAREEKKILMRALSAPPFGNYHVWWSLADSKYAGTALLVKKCFKPKSVVFNLDKIASKHEPDGRVILVEFETLRLLNTYVPNNGWKEEANSFQRRRKWDKRILEFVTQNSDKPLIWCGDLNVSHEEIDVSHPEFFSTAKQNNYTPPNKEDCGQPGFTLAERRRFGTILREGKLVDAYRFLHEDKDMERGFSWSGNPVGRYRGKRMRIDYFLVAEKLKERIVACEMHGHGIELEGFYGSDHCPVTLELSPSSNSQNEDPI 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0849 359 PANTHER AP ENDONUCLEASE 30 351 IPR004808 GO:0004518|GO:0006281
Aed10g0849 359 CDD Ape1-like_AP-endo 40 347 - -
Aed10g0849 359 SUPERFAMILY DNase I-like 40 347 IPR036691 -
Aed10g0849 359 MobiDBLite consensus disorder prediction 13 33 - -
Aed10g0849 359 Coils Coil 16 36 - -
Aed10g0849 359 TIGRFAM xth: exodeoxyribonuclease III (xth) 40 347 IPR004808 GO:0004518|GO:0006281
Aed10g0849 359 ProSiteProfiles AP endonucleases family 1 profile. 40 349 IPR004808 GO:0004518|GO:0006281
Aed10g0849 359 PANTHER DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 30 351 - -
Aed10g0849 359 Pfam Endonuclease/Exonuclease/phosphatase family 43 340 IPR005135 GO:0003824
Aed10g0849 359 Gene3D Endonuclease/exonuclease/phosphatase 5 349 IPR036691 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0849 - - gmx:100817167 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0849 10 7124964 7129641 Aed10g0849 10 7124964 7129641 ECH