Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0830 ATGGGCAAGGTCAAAATCGGAATCAACGGATTTGGAAGAATTGGCCGTTTGGTCGCCAGGGTCGCTCTTCAGAGAGACGATATTGAACTCGTTGCCGTTAACGACCCTTTCATCACCACCGATTACATGACATACATGTTCAAATACGACAGTGTTCACGGTCACTGGAAACATAACGATGTTACCGTTAAGGACGAGAAGACTCTTCTCTTCGGTGACAAGCCCGTCGCTGTTTTTGGAGTCAGGAACCCTGAAGAGATCCCATGGGGCCCAACCGGAGCTGATATTGTTATTGAGTCCACCGGAGTTTTCACAGACAAGGACAAAGCTGCCGCACATTTGAAGGTTATCAATGACCGATTTGGCATCGTTGAGGGTTTGATGACCACTGTTCATTCCATCACTGCCACCCAGAAGACCGTTGATGGGCCATCTGCCAAGGACTGGAGAGGTGGAAGAGCTGCTTCGTTTAACATCATTCCTAGCAGCACTGGAGCTGCCAAGGCTGTTGGGAAAGTCCTGCCATCTTTGAATGGAAAATTGACTGGAATGGCATTCCGTGTTCCCACCGTGGATGTCTCTGTTGTTGACCTCACAGTGAGGCTGGAGAAGGAAGCCACCTATGATGACATTAAGAAAGCTATCAAGGAGGAATCAGAGGGCAAGTTGAAGGGAATTCTTGGTTACACTGAAGATGATGTGGTCTCCACTGACTTTGTGGGTGATAGCAGATCAAGTATTTTTGATGCAAAGGCTGGAATTGCTTTGAACAAGAAGTTTGTCAAGCTTGTCTCTTGGTATGACAATGAATGGGGATACAGCTCACGGGTGATCGATCTGGTTGCTCACGTTGCCAAGGTTGCTGCTCTCTAA 873 0.4777 MGKVKIGINGFGRIGRLVARVALQRDDIELVAVNDPFITTDYMTYMFKYDSVHGHWKHNDVTVKDEKTLLFGDKPVAVFGVRNPEEIPWGPTGADIVIESTGVFTDKDKAAAHLKVINDRFGIVEGLMTTVHSITATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPSLNGKLTGMAFRVPTVDVSVVDLTVRLEKEATYDDIKKAIKEESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALNKKFVKLVSWYDNEWGYSSRVIDLVAHVAKVAAL 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0830 290 Gene3D - 1 61 - -
Aed10g0830 290 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 115 287 - -
Aed10g0830 290 SMART gp_dh_n_7 4 118 IPR020828 GO:0051287
Aed10g0830 290 Gene3D Dihydrodipicolinate Reductase; domain 2 108 269 - -
Aed10g0830 290 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 3 115 - -
Aed10g0830 290 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 3 115 IPR020831 GO:0016620
Aed10g0830 290 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 111 267 - -
Aed10g0830 290 PIRSF GAPDH 2 116 IPR020831 GO:0016620
Aed10g0830 290 PIRSF GAPDH 113 289 IPR020831 GO:0016620
Aed10g0830 290 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 113 267 IPR020829 GO:0016620
Aed10g0830 290 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 107 IPR020828 GO:0051287
Aed10g0830 290 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 183 200 IPR020831 GO:0016620
Aed10g0830 290 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 223 238 IPR020831 GO:0016620
Aed10g0830 290 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 126 142 IPR020831 GO:0016620
Aed10g0830 290 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 115 IPR036291 -
Aed10g0830 290 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 115 287 IPR020831 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0830 Aed-Chr10 6925607 6928515 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0830 K00134 - gmx:100781161 524.242