Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0828 ATGCAGCTCCTGCAAACTTCTTATCTGTTCACTTTCCCTAAACCCCTAAACCCTTCTTCCCCTCACCGTTTCCACCATCGTCTTCCGCCACGACCTCCGCCACTCCTCCACCGGTGCCCCCTCTCCGGCACCCTCCCCGCCCCCAAAGCCTTCAGCTCCGACGAGTTCCCAGTAGACGAGACCTTCCTGGAGAACTTCGGTCCCAAGGACAAAGAAACTGAAGATGAAGCCCGGCGCCGTAACTGGATCGAACGCGGGTGGGCCCCGTGGGAGGAAATCCTCACCCCCGAGGCCGATTTCGCGCGGAAGAGCCTCAACGAAGGCGAGGAGGTCCCCCTCCGCTCCCCGGAAGCAATCGAAGCCTTCAAAATGCTTAACCCTAACTACCGCCAGAAGAAGAGAGAAGAGATGGGGCTAACAGAGGAAGAGTTCTACGCAAAGCAGTTCGAGATCAAGGGCGAGATTCCGGACCCGCTCGTGACCACGTGGGCGGGCCCGCTGGTCGTCCGCCTCGTTCCGCCGCGCGACTGGCCGCCTCGCGGGTGGCGCGTGGACCGCAAGGAGCTCGCGTTCATCCGCGAGGCGCATAGGATGCAGGCGAGGAGGGTGAGGCTGGAGGAGGTGGTGGAGGGGAGTGGAGTGAGGAGTGAGACCGACGACGTGTGTTTGGATAGGTACAAGGTGTTTCTCAAGCAGTATAAGGAGTGGGTTGAAGCTAATAAGGATAGCTTGGAAGAGGAGTCTTACAAGCAAGACCAAGATTATTACCCTGGTAGAAGAAAAAGAGGGAAGGACTACAAGGACGGGATGTATGAGCTTCCGTTCTATTATCCTGGCCAAATTTGTGTAGGGAAGGTGACAATGTTGCATCTCTATCAAGGGGCATTTGTTGACATTGGCGGGGTACATGATGGGTGGGTTCCTATAAAGAACAATGATTGGTATTGGCTTCGCCATCACATAAAAGTTGGTATGCAGGTCATTGTTGAAATTACGGCAAAGCGAGATCCTTATCGCTTCCGCTTTCCTATTGAACTTCGTTTTGTCGATCCAAATATAGATCATCTAGTCTTTAACAGATTTGACTTCCCACCAATATTGCATCGTGATGAAGATACTAATGACGATGAAATACGGCGAGACTGTGGAAGACCTCCTGTTCCTAGGAAAGATCCAGGAGACAAGCCAGAGGAGGAACCTCTACTGTCTAATCATCCATATGTAGAGAAGTTGTGGCAAATTAATGTAGCTGAGCAAATGATTGTGGATGATATGGCAATTAATCCTGATAAATATGAAGGCAAAAATCTGTCAGATTTGGTTGATGAAGAAGAATTTGATGAACAAAATGCTGTCGAGTATACAAAAGTAAAATATAAGAATACGATGCTACCACAAACTACTCTGAAAACAAGTGTCAAAGAGCTTGACTTAGAGGCTGCCCTTGCTGAGCGTGAGCACCATGTTAAACTAAGGAAGGAAGCAGAGGACAGAGGTGAGAAATACAAAATTACCAAACTGAGGCGCAATGTTGAGATGGATGAGTATGACTACATGCATTGGCGTAGATCATTTGAAGAAAGAGAAGCATTGATTAGAGACATCAGCTGTCGCAAAGCTCTTGGTCTGCCATTGGAAGAGCCAGGAAGGTATATGGATGCTAGTTATTTTGGTAAAGACCAATATGATCCTTCAAGTGCGCTGTATCGCTATGACTACTGGGGGGAACCCAAGAATTCAGAGAAGAGCATGCAAGAGCGGATGACAGATATCCATAACAAAAAAATTGTGGGAAAGGGCAATGTTTGGTACGAAATGTCATATGAAGAGTGCATCAAACAACAAATGGAATATGAAGCCCAGTCTAAGGAGCAAGAAAACGATGAAGATACAAGGCAAGGTCAAGCTGATGAAGATGAGGATGACGATGATGATGACGATTTTGACTTCAGTATTATGAGTGGTTTCGGTAGTAATTTCACAGACCAGCCTCATGTTAATGGGACCGAGTCTTCTACAATATCAGGTGAGGGAATGTTTGAGGATTGA 2049 0.4807 MQLLQTSYLFTFPKPLNPSSPHRFHHRLPPRPPPLLHRCPLSGTLPAPKAFSSDEFPVDETFLENFGPKDKETEDEARRRNWIERGWAPWEEILTPEADFARKSLNEGEEVPLRSPEAIEAFKMLNPNYRQKKREEMGLTEEEFYAKQFEIKGEIPDPLVTTWAGPLVVRLVPPRDWPPRGWRVDRKELAFIREAHRMQARRVRLEEVVEGSGVRSETDDVCLDRYKVFLKQYKEWVEANKDSLEEESYKQDQDYYPGRRKRGKDYKDGMYELPFYYPGQICVGKVTMLHLYQGAFVDIGGVHDGWVPIKNNDWYWLRHHIKVGMQVIVEITAKRDPYRFRFPIELRFVDPNIDHLVFNRFDFPPILHRDEDTNDDEIRRDCGRPPVPRKDPGDKPEEEPLLSNHPYVEKLWQINVAEQMIVDDMAINPDKYEGKNLSDLVDEEEFDEQNAVEYTKVKYKNTMLPQTTLKTSVKELDLEAALAEREHHVKLRKEAEDRGEKYKITKLRRNVEMDEYDYMHWRRSFEEREALIRDISCRKALGLPLEEPGRYMDASYFGKDQYDPSSALYRYDYWGEPKNSEKSMQERMTDIHNKKIVGKGNVWYEMSYEECIKQQMEYEAQSKEQENDEDTRQGQADEDEDDDDDDDFDFSIMSGFGSNFTDQPHVNGTESSTISGEGMFED 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0828 682 ProSiteProfiles S1 domain profile. 279 347 IPR003029 GO:0003676
Aed10g0828 682 Coils Coil 608 633 - -
Aed10g0828 682 MobiDBLite consensus disorder prediction 617 682 - -
Aed10g0828 682 Coils Coil 478 498 - -
Aed10g0828 682 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 10 45 668 IPR044967 GO:0000427|GO:0003723
Aed10g0828 682 MobiDBLite consensus disorder prediction 654 676 - -
Aed10g0828 682 MobiDBLite consensus disorder prediction 372 401 - -
Aed10g0828 682 MobiDBLite consensus disorder prediction 631 650 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0828 - - gmx:100783002 1241.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0828 10 6909979 6917780 Aed10g0828 10 6909979 6917780 ECH