Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0817 ATGAAGCTCGATACCACCGGTCTGGAATCGTTTCCCTCACAGATTGCGCCTCATAACGACTTCGCTGGAGAACTCGCTGCCGCTCCATCCTTCGACCTTCCGAATTCCAATGATTTCGATGGCTTCTTGAAAGGAGCTATTCAGATGGTGAAGCCCGCGAAGGGTACTACAACTCTCGCTTTTATTTTCAAGGATGGTGTTATGGTGGCTGCTGATTCTCGAGCTAGCATGGGAGGATATATTTCATCGCAGTCTGTGAAGAAAATTATTGAAATTAATCCGTATATGCTTGGGACAATGGCTGGTGGTGCCGCTGATTGTCAGTTTTGGCACAGGAATCTCGGGATCAAGTGTCGTTTGCACGAGTTGGCAAATAAAAGGAGAATTTCAGTGACTGGAGCCTCAAAGCTACTTGCCAACATTTTATACTCATATCGTGGAATGGGGTTATCTGTTGGTACCATGATTGCTGGATGGGATGAGACGGGTCCTGGTCTATATTATGTTGACAGTGAAGGAGGAAGACTTAAAGGCACTAGATTCTCTGTTGGATCTGGTTCACCATATGCTTATGGTGTATTGGACAGCGGGTACCGATATGACCTGTCAATTGACGAAGCTGCTGAACTTGCTCGACGAGCAATTTATCACGCAACATTTCGTGATGGGGCCAGTGGTGGAGTTGCTAGCGTTTACCACGTGGGACCAAATGGATGGAAGAAATTGTCTGGTGATGATGTTGGTGAACTTTATTACCATTACAACCCAGTTACCCCAAGCACCGTTGTGGAACAAGAAATGGCTGAGGCAACTGGAGCTTGA 822 0.4647 MKLDTTGLESFPSQIAPHNDFAGELAAAPSFDLPNSNDFDGFLKGAIQMVKPAKGTTTLAFIFKDGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYRYDLSIDEAAELARRAIYHATFRDGASGGVASVYHVGPNGWKKLSGDDVGELYYHYNPVTPSTVVEQEMAEATGA 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0817 273 ProSitePatterns Proteasome beta-type subunits signature. 59 106 IPR016050 GO:0005839|GO:0051603
Aed10g0817 273 ProSiteProfiles Proteasome beta-type subunit profile. 55 234 IPR023333 -
Aed10g0817 273 PRINTS Proteasome component signature 220 231 IPR000243 GO:0004298|GO:0005839|GO:0051603
Aed10g0817 273 PRINTS Proteasome component signature 184 195 IPR000243 GO:0004298|GO:0005839|GO:0051603
Aed10g0817 273 PRINTS Proteasome component signature 195 206 IPR000243 GO:0004298|GO:0005839|GO:0051603
Aed10g0817 273 PRINTS Proteasome component signature 63 78 IPR000243 GO:0004298|GO:0005839|GO:0051603
Aed10g0817 273 CDD proteasome_beta_type_5 56 243 - -
Aed10g0817 273 Pfam Proteasome subunit 54 234 IPR001353 GO:0005839|GO:0051603
Aed10g0817 273 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 56 261 IPR029055 -
Aed10g0817 273 PANTHER PROTEASOME SUBUNIT BETA 29 270 - -
Aed10g0817 273 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 46 254 IPR029055 -
Aed10g0817 273 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 29 270 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0817 K02737 - gmx:100779240 518.85