Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0804 ATGAGAAGGCCATGGAAGCATTTTAAGAAAAAACATGATCTCTTCGAATGTCTTCCAGACGATCTCGTTGTCCTTATTCTATCCAAGCTCAGCTCCAAAGCATCTTCTCCTTCCGATTTCATCAACACCATCTTAACATGCAAGAGGCTAAACCGGTTAGGCCTGCACCGTCTTGTGTTATCCAAAGCCGGACCTAAAGTATTCGCCATAAAGCCTCAGAATTGGTCAGAATATGCTCACTCTTTCCTTAAGCACTGCGCTAACGCCGGTAACGTCGATGCCTGTTACACTCTCGGAATGATCCGATTTTACTGTTTGAAAAACCGAGGGAGCGGGCTATCGTTAATGGCGAAGGCGGCTATGAAGCTGCACGCGCCGGCTCTGTACTCGCTCGCGGTAATTCAGTTCAACGGCAGCGGCGGTTCAAAGCGTGACAAAGATCTACGCGCGGGCGTGGCGTTGTCGGCGCGTGCGTCATTACTCGGCCACATCGACGCGCTTCGTGAGTTAGGCCATTGTCTTCAAGACGGTTACGGCGTCCGGCAGAACGTCACGGAGGGGAGAAAACTCCTGGTGCAGGCCAACGTGCGCGAGCTCACGTACGTTCTACGCGCCGTCGCACCTTCGAGTTGCGATTCCTCGTTGATGACGTGGCCTGCACTTAGATTTCAAAGGAACAATACGGCAGCAGCGGCGGCGGCTTGTCCGTTGCTGAGTGACTACGGTTTCAACGTGGCGGTGCCGGAGGTGCAGCCGGCGAACTGGTTTCTGAGAGAGTGGTTTGAGTCCGGTAAGGGGAAACTCGAAGAAGGACTCAGGCTTTGCGCGCACATTGGATGCGGTCGACCGGAGACGCGGCCGCACGAGTTTCGACGGTGTTCGGTTTGCGGCAAAGTTAACTATTGCTCGCGTGGATGTCAAGCGTTGGATTGGAAGTTGCGGCATAAGGTGGAGTGTACGCCGGCGGAACTCTACGGCGGAGGTGACGACGGTGGCGTGGATGTGGAAAATGAATTTGTGGTCCCAAACGACGCTGTTGAACTTTGA 1047 0.5406 MRRPWKHFKKKHDLFECLPDDLVVLILSKLSSKASSPSDFINTILTCKRLNRLGLHRLVLSKAGPKVFAIKPQNWSEYAHSFLKHCANAGNVDACYTLGMIRFYCLKNRGSGLSLMAKAAMKLHAPALYSLAVIQFNGSGGSKRDKDLRAGVALSARASLLGHIDALRELGHCLQDGYGVRQNVTEGRKLLVQANVRELTYVLRAVAPSSCDSSLMTWPALRFQRNNTAAAAAACPLLSDYGFNVAVPEVQPANWFLREWFESGKGKLEEGLRLCAHIGCGRPETRPHEFRRCSVCGKVNYCSRGCQALDWKLRHKVECTPAELYGGGDDGGVDVENEFVVPNDAVEL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0804 348 Pfam MYND finger 280 319 IPR002893 -
Aed10g0804 348 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 6 333 - -
Aed10g0804 348 Gene3D - 266 323 - -
Aed10g0804 348 ProSiteProfiles Zinc finger MYND-type profile. 277 319 IPR002893 -
Aed10g0804 348 SUPERFAMILY F-box domain 11 71 IPR036047 GO:0005515
Aed10g0804 348 SUPERFAMILY HCP-like 77 194 - -
Aed10g0804 348 PANTHER MYND DOMAIN-CONTAINING 6 333 IPR044508 -
Aed10g0804 348 SUPERFAMILY HIT/MYND zinc finger-like 273 321 - -
Aed10g0804 348 Gene3D Tetratricopeptide repeat domain 55 204 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0804 Aed-Chr10 6676766 6679804 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0804 - - gmx:100820040 609.757