Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0790 ATGGCTGCAGCAATCAGCAACATGGGTTTACAACATGTAAAGAATGATAATGTTTTGAGGCTTAGTTTTTGGTCTCCACGCAACACTACTACTACTACTAACATGTCGAATAGTAATAAACGAAGATTTTTGTCTGTGAGTGCAAGTTTTAGTGATAGTCCCCGGAAAATGGACACAGCGAATAGAGTTAATGTGAATGGAATACATGTGGCAGAGGCTCCTCTAGAAGCAGAAGATAAAACTATTGTTACCAGTTTGCGTGGAAGGTTTGTGGAGAATAAGTTTGTGTTTAGGCAAATTTTTGTTATCAGGTCTTATGAAATTGGACCAGACAAAACTGCCACAATGGAGACACTCATGAATTTTCTTCAGGAAACTGCTTTGAATCATGTCACCGGCTCTGGGATTGGTGGAGAAGGGTTTGGAGCAACCCACCAGATGAGCCTTAGAAAACTCATTTGGGTCGTTATTCGTGTTCAAGTTCAAGTACAAAGATATAACAAATGGGGAGACGAAATTGAAGTTGATACTTGGGTGGCTGCAGAAGGAAAGAATGGAATGCGAAGAGATTGGATAATCCGGGATCATTACACCAAAGAGATCATAACAAGAGCAACAAGCACATGGGTGATCATGAATAGACAAACAAGAAGACTATCAAAGATCCCTGAAGAGGTTAAACAAGAGCTTTTTCCTTTTTACCTCAATAGGCTTGCCGTTCCTACCGAAGAAGCAGATTGTGAAAAGATACACAAACTCACTGATGACACTGCTCAGAGAATCTTATCTGGATTGGCTCCAAGGTGGAATGACATGGATGCTAACCAGCATGTCAACAATGTGAAATACATTGGATGGATTCTAGAGAGTGTGCCAATTGAAGTGCTGGAACATTATAATATGACAGGCATGACTTTGGAGTTTAGGCGTGAATGTACACAATCAGATTTGTTGGAATCGATGACGTGTCCAACAGCAAGAGTTATTGAGTCTAATAATAACTCAAAGAACAGAAAACCCAACCTGCAATACACACACTTGCTTCGTCTGCAACATGATAAAGCAGATGTTGTCCGAGCCAGAACTGAATGGAATTCTAAGCAAAAGCAACAGTGA 1116 0.4041 MAAAISNMGLQHVKNDNVLRLSFWSPRNTTTTTNMSNSNKRRFLSVSASFSDSPRKMDTANRVNVNGIHVAEAPLEAEDKTIVTSLRGRFVENKFVFRQIFVIRSYEIGPDKTATMETLMNFLQETALNHVTGSGIGGEGFGATHQMSLRKLIWVVIRVQVQVQRYNKWGDEIEVDTWVAAEGKNGMRRDWIIRDHYTKEIITRATSTWVIMNRQTRRLSKIPEEVKQELFPFYLNRLAVPTEEADCEKIHKLTDDTAQRILSGLAPRWNDMDANQHVNNVKYIGWILESVPIEVLEHYNMTGMTLEFRRECTQSDLLESMTCPTARVIESNNNSKNRKPNLQYTHLLRLQHDKADVVRARTEWNSKQKQQ 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0790 371 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 31 370 IPR045023 GO:0006633|GO:0016297
Aed10g0790 371 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 254 364 IPR029069 -
Aed10g0790 371 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 91 238 IPR029069 -
Aed10g0790 371 Gene3D Hotdog Thioesterase 87 370 - -
Aed10g0790 371 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 31 370 - -
Aed10g0790 371 Pfam Acyl-ACP thioesterase 96 365 IPR002864 GO:0006633|GO:0016790
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0790 Aed-Chr10 6544423 6547138 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0790 88 367 Acyl Lipid Metabolism Gene Families AT1G08510 55.000 2.58e-107 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0790 K10781 - gmx:100814191 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0790 10 6544423 6547138 Aed10g0790 10 6544423 6547138 ECH