Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0789 ATGACATCAATGGTGGCATCCATTAACACAGGGCTACAATTTCGAGGAAATAATTGGTGCAATGCCAATAAGAAAATTGTAGACAAGCAGGGAGGGGAGTTTTTGAAGCCAAGCTTTAAATATTATTCACCATGCAACACTAATGCGTTGAACAATAAACGAAGATTTTCATTGTTGATGAGTGCAAGTTCTAGGGGAGTGGACACAAACAATGGAATAAAACATGTTCCATTGATTGCAAATGAAAACACAGAACATATTGTTACCTTGTTTCGTGAAAGGTTTGTGGAGGACAGGTTTGTATGTAGGCAAAATTTCTGTGTCAGGTCTTACGAAATTGGACCAGATAAAACCATCACCATGGAGACACTCATGAGTTTTCTCCAGAATGGTATGCGAAGAGATTGGATAATCAGGGATCATCACACCAAAGTGATCATAGCAAAAGCAACCAGCACATGGGCGATGATGAACAGAGAAACAAGAAGATTATCGAAGATGCCTGAAGAAGTTAGACAAGAACTTGTTCCTTTCTACTTGAATAGGTTTGCCATTGCCAGTGAAGAAATAGATCATCAGAAGATACCAAAGCTCACTGCTGAGAGTGAGAGTTTTCGATTAGCAGTGACTCCAGGGTGGACCGACATGGATGCTAACCAGCATGTTAGCAACATAAAATACATCAAATGGATCTTAGAGAGCGTGCCACGAGAAGTATTAGAAGATTATAAAATGACGAGCATGACTATAGAGTTTCGGCGTGAATGTACTCAATCTGATTTGCTGGAATCAGTGACTAGTCCTTCTTCATCCACCACCGTCATTGGAGCCTCTAATAATAATAACAACTCTGTTAATCTGCAATATATACACCTGCTTGGTCTACAAGACAATAAAGCAGAGTTGGTCCGAGCCAGAACAGACTGGCAGCTTGAGCAAAATCCCTAA 948 0.403 MTSMVASINTGLQFRGNNWCNANKKIVDKQGGEFLKPSFKYYSPCNTNALNNKRRFSLLMSASSRGVDTNNGIKHVPLIANENTEHIVTLFRERFVEDRFVCRQNFCVRSYEIGPDKTITMETLMSFLQNGMRRDWIIRDHHTKVIIAKATSTWAMMNRETRRLSKMPEEVRQELVPFYLNRFAIASEEIDHQKIPKLTAESESFRLAVTPGWTDMDANQHVSNIKYIKWILESVPREVLEDYKMTSMTIEFRRECTQSDLLESVTSPSSSTTVIGASNNNNNSVNLQYIHLLGLQDNKAELVRARTDWQLEQNP 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0789 315 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 17 130 - -
Aed10g0789 315 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 130 313 IPR045023 GO:0006633|GO:0016297
Aed10g0789 315 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 17 130 IPR045023 GO:0006633|GO:0016297
Aed10g0789 315 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 202 309 IPR029069 -
Aed10g0789 315 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 130 313 - -
Aed10g0789 315 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 97 183 IPR029069 -
Aed10g0789 315 Pfam Acyl-ACP thioesterase 129 310 IPR002864 GO:0006633|GO:0016790
Aed10g0789 315 Gene3D Hotdog Thioesterase 129 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0789 Aed-Chr10 6537587 6539293 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0789 100 309 Acyl Lipid Metabolism Gene Families AT1G08510 42.254 8.03e-49 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0789 K10781 - gmx:100791811 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0789 10 6537587 6539293 Aed10g0789 10 6537587 6539293 ECH