Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0767 ATGGCTCCTCCCAGAGGTGGTGGTGGATTCAGAGGTGGTAGGGGCGGTGACAGAGGTAGAGGAAGGGGTGGTGGTGGAGGAAGAGGAGGAGACAGGGGCACTCCGTTCAAAGCTAGAGGCGGTGGCAGAGGTGGCCGTGGAGGAGGCAGGGGCGGTGGCCGTGGCGGAGGCAGAGGCGGAATGAAGGGAGGTAGCAAGGTCGTGGTTCAGCCTCATAGACATGACGGTATTTTCATTGCCAAGGGTAAAGAAGACGCCCTTGTTACTAAGAATCTTGTTCCTGGTGAAGCTGTTTACAATGAGAAAAGGATCACTGTTCAGAACGAAGATAGCACCAAAGTTGAGTACAGAATTTGGAATCCTTTCCGCTCGAAGTTGGCTGCTGCCATCCTCGGTGGAGTTGACAACATATGGATTAAACCCGGAGCCAGAGTCCTTTACCTAGGAGCTGCTTCTGGGACCACTGTTTCTCATGTGTCGGATGTTGTTGGCCCTGCTAGGATTTTGGGGCTGAATGCTTCATATTATCTCAAAACAGGAGGTCATTTTGTTATTTCAATCAAGGCTAACTGCATTGACTCCACAGTCCCTGCCGAGGCAGTGTTTGAAAGCGAAGTGAACAAATTGAAGGCTGATCAATTCAAACCATTTGAGCAGGTCACCCTTGAACCATTTGAGAGGGACCATGCCTGCGTTGTTGGTGGGTACAGAATGCCCAAGAAGAAAAAAGATGCTGCTGAGTAA 744 0.5067 MAPPRGGGGFRGGRGGDRGRGRGGGGGRGGDRGTPFKARGGGRGGRGGGRGGGRGGGRGGMKGGSKVVVQPHRHDGIFIAKGKEDALVTKNLVPGEAVYNEKRITVQNEDSTKVEYRIWNPFRSKLAAAILGGVDNIWIKPGARVLYLGAASGTTVSHVSDVVGPARILGLNASYYLKTGGHFVISIKANCIDSTVPAEAVFESEVNKLKADQFKPFEQVTLEPFERDHACVVGGYRMPKKKKDAAE 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0767 247 PANTHER RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN 5 165 - -
Aed10g0767 247 PANTHER RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN 166 245 - -
Aed10g0767 247 Gene3D Vaccinia Virus protein VP39 167 238 IPR029063 -
Aed10g0767 247 Gene3D Phosphorylase Kinase; domain 1 64 119 - -
Aed10g0767 247 SMART Fibrillarin_2 69 238 IPR000692 GO:0003723|GO:0006364|GO:0008168
Aed10g0767 247 Pfam Fibrillarin 69 165 IPR000692 GO:0003723|GO:0006364|GO:0008168
Aed10g0767 247 Pfam Fibrillarin 166 237 IPR000692 GO:0003723|GO:0006364|GO:0008168
Aed10g0767 247 PANTHER BNAA03G47570D PROTEIN 5 165 - -
Aed10g0767 247 PANTHER BNAA03G47570D PROTEIN 166 245 - -
Aed10g0767 247 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 69 237 IPR029063 -
Aed10g0767 247 Gene3D Vaccinia Virus protein VP39 120 166 IPR029063 -
Aed10g0767 247 PRINTS Fibrillarin signature 87 106 IPR000692 GO:0003723|GO:0006364|GO:0008168
Aed10g0767 247 PRINTS Fibrillarin signature 115 134 IPR000692 GO:0003723|GO:0006364|GO:0008168
Aed10g0767 247 PRINTS Fibrillarin signature 142 163 IPR000692 GO:0003723|GO:0006364|GO:0008168
Aed10g0767 247 MobiDBLite consensus disorder prediction 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0767 Aed-Chr10 6293665 6296391 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0767 K14563 - mus:103972984 305.449