Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0765 ATGGAGAACACTGGTTTGTGTGTATGGCTTATGCTACTCCTCTTGTTGGGGTGTGCTATTTCCTCCTCGGAATCCAAGTATATAAGGTACAACACAACGTCAACCACTGTTCCTGGCAAGCTCAACGTTCACTTGGTCCCTCACACTCACGATGATGTTGGCTGGTTGAAGACCATTGATCAGTACTATGTCGGTTCCAACAACTCAATTCAGGGAGCCTGTGTTCAAAACGTGCTTGATTCCTTGGCATTTTTCCAGCGATGGTGGAGTGAACAGAGTGATGCTATCCAGAAAATAGTCAAGGAGCTGGTCAACTCTGGTCAATTGGAGTTCATAAATGGTGGTTTTTGTATGCATGATGAGGCTGCTACTCATTACATTGACATGATTGATCAGACAACTCTTGGACATCAATTTATCAAAGAAGAATTTGGTGTGACTCCCAGAATAGGGTGGCAGATTGATCCATTTGGACATTCTGCTGTGCAGGCCTATTTGTTGGGGGCGGAGGTTGGATTTGACTCTCTATTCTTTGGACGAATTGACTACCAAGACAGAGCTAAGAGAAAAGATGAAAAAACTCTTGAAGTTGTGTGGCGGGGCTCCAAGAGCCTTGGTTCATCATCACAGATATTTTCTGGTGCGTTCCCTGAGAATTATGAACCTCCCAGTAATTTCTACTATGAAGTAAATGATAATTCTCCCATTGTTCAGGATGATGTCAGTTTATTTGATTACAATGTCCCTGAAAGAGTAAATGAGTTTGTGGCAGCTGCAATATCACAGGCCAATATTACGCGCACAAATCATATAATGTGGACAATGGGGACAGATTTCAAGTACCAATATGCACAAAGCTGGTTTCGGCAATTGGACAAGTTTATTCACTATGTTAATCAAGATGGTCGTGTTCATGCCTTATACTCGACTCCATCAATATATACTGATGCAAAACATGCTGCCAATGAGGCATGGCCAATCAAGACTGACGACTTCTTTCCGTATGCAGATCGTGTAAATGCCTATTGGACAGGGTATTTTACAAGCAGGCCAGCAAGCAAAGGTTATGTCAGATTGATGAGTGGCTACTACCTGGCAGCAAGGCAGTTGGAATATTTTAAAGGGAAGAGTGCTTCAGGTCCCAAAACTGACTCTTTGGCTGAAGCTTTGGCTATTGCTCAACACCATGACGCGGTATCTGGTACAGAAAAGCAGCATGTTGCTAATGATTATGCTAAACGACTTTCAATAGGTTACACAGAGGCTGAGAAAGTTGTTGCAGTATCACTTGCATATTTGACAGAGGGAGCAACCAAAACAGGCTATAAGAATCCACAGATTAAATTTCAACAGGCAAGTAATGATTGTCCACTTCTGAACATAAGTTACTGTCCTGCATCAGAAGTTGACTTATCAAATGGGAAAAACCTGGTGGTTATTGTTTACAATTCTCTGGGATGGAAAAGAGAGGATATCATAAGGATTCCTGTTGTCAATGAAAAAGTTGTTGTTCGGGATTCCAGTGGGAAAAAAATCCAATCCCAGCTGGTGCCAATACTTGATGATTTTCTTGGTTTAAGAAACTACCACACTGCAGCATACTTGGGAGTGTCTCCAACTGTAAAACCCAAATACTGGCTTGCATTTTCAGCAGATGTTCCCCCACTTGGTTTTAGTACTTACCATGTATCCTATGCCAAAAAAGATGATAGAGATACAGATGACCAACCATGGAATAAGAGTGATACAGTTACAGTGGGCATAAAAAACTTGAAACTAGTTTATTCTGTGAAGGAAGGGAAACTTACTAAATATATCAACAGCAGAAGCAAGGTCAAAGAATCTCTAGAGCAGGCATATAAATTTTACACCGGGTATGGAAATGATGGAACAGAAACTGCTCAGGCTTCTGGAGCATATATTTTTCGCCCTGATGGTCCACCCTCTCCCATCAAATCCAACGGGAAGTCTCCTCTCACAGTTTTTCGGGGACCTATTGTGCACGAAGTGCATCAGAAAATCAGTCCATGGATATACCAGACCACTAGACTGTACAAGGGGAAAGAGCATGCTGAAGTTGAGTTTATTGTTGGACCTATACCCATTGATGATGGAGTTGGCAAAGAAATTGCAACTGAGATCAAAACAAATCTAGCAAGCAACAAAACCTTCTACACTGATTCCAATGGACGTGATTTCATTGAACGCGTCCGAGACTATAGAAAAGACTGGCACTTGGAAGTAAATCAACCTGTTGCTGGAAATTATTACCCTATCAACCTTGGGATTTACCTGAAAGATAAAAGCAAAGAGTTCTCTATATTGGTAGATAGAGCTGTGGGGGGCTCCAGCATCATAAATGGACAATTGGAGCTAATGGTTCATAGGAGGTTACTTCAGGATGATTCTAGAGGTGTTGGTGAGGCACTGAATGAAACAGTTTGCATCCATGATAAGTGCACCGGGTTAACTGTGCTAGGGAAGTACTACTTCAGAATTGATCCTGTAGGAGAGGGTGCGAGATGGCGTCGATCACTTGGTCAGGAGATATACTCACCCTTGCTTTTAGCCTTCACAGAGAGTGAAGGCCACTGGGGAGATTCTCATGTCACAACCTTCTCAGGAATAGATTCCTCGTACAACTTACCTGAGAACGTTGCAATAATAACCCTCCAGGATCTGGGTGATGGAAAAGTTCTCCTTCGGCTGGCACACTTATACGAGATTGATGAGGACAAGTATCTTTCAGTTAAGGCTACTGTAGAACTTAAAAAGGTGTTTCCCTACAAACAGATAAACAAAATAACTGAAGTGAGCTTATCAGCAAACCAAGAAAGAGCAGAAATGGAGAGGAAGAGATTGGTTTGGCAAGTTAAAGGGTCACCTCCAGAACCCAAGGTGTGGAGGGGAGGACCAGTAGATCCACAAAATCTAATTATAGAACTTGCTCCCATGGAAATAAGGACTTTTATTATCAGTTTTAGGCATTAA 2991 0.4206 MENTGLCVWLMLLLLLGCAISSSESKYIRYNTTSTTVPGKLNVHLVPHTHDDVGWLKTIDQYYVGSNNSIQGACVQNVLDSLAFFQRWWSEQSDAIQKIVKELVNSGQLEFINGGFCMHDEAATHYIDMIDQTTLGHQFIKEEFGVTPRIGWQIDPFGHSAVQAYLLGAEVGFDSLFFGRIDYQDRAKRKDEKTLEVVWRGSKSLGSSSQIFSGAFPENYEPPSNFYYEVNDNSPIVQDDVSLFDYNVPERVNEFVAAAISQANITRTNHIMWTMGTDFKYQYAQSWFRQLDKFIHYVNQDGRVHALYSTPSIYTDAKHAANEAWPIKTDDFFPYADRVNAYWTGYFTSRPASKGYVRLMSGYYLAARQLEYFKGKSASGPKTDSLAEALAIAQHHDAVSGTEKQHVANDYAKRLSIGYTEAEKVVAVSLAYLTEGATKTGYKNPQIKFQQASNDCPLLNISYCPASEVDLSNGKNLVVIVYNSLGWKREDIIRIPVVNEKVVVRDSSGKKIQSQLVPILDDFLGLRNYHTAAYLGVSPTVKPKYWLAFSADVPPLGFSTYHVSYAKKDDRDTDDQPWNKSDTVTVGIKNLKLVYSVKEGKLTKYINSRSKVKESLEQAYKFYTGYGNDGTETAQASGAYIFRPDGPPSPIKSNGKSPLTVFRGPIVHEVHQKISPWIYQTTRLYKGKEHAEVEFIVGPIPIDDGVGKEIATEIKTNLASNKTFYTDSNGRDFIERVRDYRKDWHLEVNQPVAGNYYPINLGIYLKDKSKEFSILVDRAVGGSSIINGQLELMVHRRLLQDDSRGVGEALNETVCIHDKCTGLTVLGKYYFRIDPVGEGARWRRSLGQEIYSPLLLAFTESEGHWGDSHVTTFSGIDSSYNLPENVAIITLQDLGDGKVLLRLAHLYEIDEDKYLSVKATVELKKVFPYKQINKITEVSLSANQERAEMERKRLVWQVKGSPPEPKVWRGGPVDPQNLIIELAPMEIRTFIISFRH 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0765 996 Pfam Glycosyl hydrolases family 38 N-terminal domain 42 336 IPR000602 GO:0004559|GO:0006013
Aed10g0765 996 SMART Alpha_mann_mid_2 341 415 IPR015341 GO:0004559|GO:0006013
Aed10g0765 996 SUPERFAMILY Families 57/38 glycoside transferase middle domain 340 434 IPR028995 -
Aed10g0765 996 PANTHER ALPHA-MANNOSIDASE 16 995 - -
Aed10g0765 996 SUPERFAMILY Glycoside hydrolase/deacetylase 30 337 IPR011330 GO:0005975
Aed10g0765 996 Pfam Alpha mannosidase middle domain 341 432 IPR015341 GO:0004559|GO:0006013
Aed10g0765 996 Gene3D Glycoside hydrolase family 38, central domain 305 383 IPR037094 GO:0004559|GO:0006013
Aed10g0765 996 SUPERFAMILY Galactose mutarotase-like 455 994 IPR011013 GO:0003824|GO:0005975|GO:0030246
Aed10g0765 996 Gene3D Glycoside hydrolase family 38, central domain 384 439 IPR037094 GO:0004559|GO:0006013
Aed10g0765 996 CDD GH38N_AMII_LAM_like 41 300 - -
Aed10g0765 996 Gene3D Glycoside hydrolase 38, N terminal domain 41 304 IPR027291 -
Aed10g0765 996 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 885 991 IPR041147 -
Aed10g0765 996 Gene3D - 587 852 - -
Aed10g0765 996 Pfam Glycosyl hydrolases family 38 C-terminal domain 590 804 IPR011682 GO:0004559|GO:0006013
Aed10g0765 996 Gene3D - 465 586 IPR013780 -
Aed10g0765 996 Gene3D - 870 996 - -
Aed10g0765 996 PANTHER ALPHA-MANNOSIDASE 16 995 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0765 Aed-Chr10 6272770 6280609 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0765 1 908 Glycoside Hydrolase AT5G13980 67.166 0.0 1293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0765 K01191 - gmx:100798150 1887.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0765 10 6272770 6280609 Aed10g0765 10 6272770 6280609 ECH