Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0752 ATGGCCATGCATCTGCAAGCACTCACAATAAGCCTCAACACTGCAACTGCCAATGCTGCTGCTGGCCTGCGACCACAGTTGAACCCTTTGGCTTTGAAGTCATCTTTCTTCTCTGGTTCCATTAACCTCTTGCTTCATCCAAATCAACACCTTCTTACTTCTGCAGCTCCCAGGATTTCCATGCGTGTGGCCTCTAAGCAAGCCTATATCTGTCGCGATTGCGGATATATTTACAATGATAGGACCCCCTTTGAGAAGTTGCCTGATAAATTCTTCTGCCCTGTTTGTGGTGCTCCAAAACGAAGGTTTAGGCCATACGCTCCAGCAGTTGCAAAAAATGCTAATGATAAAGATGTTAGAAAGGCACGAAAATCCGAAATCCAGAAAGAAGCAACAATCGGGAACGCACTTCCTATTGCAGCTGCCGTGGGAATTGCAGTGCTTGTGGGATTATACTTCTATCTCAACAACAATTTTTAA 480 0.45 MAMHLQALTISLNTATANAAAGLRPQLNPLALKSSFFSGSINLLLHPNQHLLTSAAPRISMRVASKQAYICRDCGYIYNDRTPFEKLPDKFFCPVCGAPKRRFRPYAPAVAKNANDKDVRKARKSEIQKEATIGNALPIAAAVGIAVLVGLYFYLNNNF 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0752 159 CDD rubredoxin 69 106 IPR024935 GO:0005506
Aed10g0752 159 Pfam Rubredoxin 69 103 IPR024935 GO:0005506
Aed10g0752 159 SUPERFAMILY Rubredoxin-like 66 110 - -
Aed10g0752 159 Gene3D - 66 106 - -
Aed10g0752 159 ProSiteProfiles Rubredoxin-like domain profile. 66 106 IPR024934 GO:0005506
Aed10g0752 159 PANTHER RUBREDOXIN-LIKE SUPERFAMILY PROTEIN 2 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0752 Aed-Chr10 6174733 6175594 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0752 - - gmx:100500575 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0752 10 6174733 6175594 Aed10g0752 10 6174733 6175594 ECH
Aed5g2202 5 24094123 24095675 Aed10g0752 10 6174733 6175594 PCT