Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0720 ATGAATTCCTTTCGCAGTTCCTCCCATCACCGCACCAAACCCAACCCAGCCGCCCGAATCCCTCGCCAACCCGGCATTTCCTCCGACGACAAACAGATGCCACCGCTCACCGCTCCGACTCCGGCTTTCCGCTTCCGCTCTCTCTCCAGCTGCGCCCACAACCGCCCCACCTCCTCCTCCGCCGCCAACGCCGTCAAGCGATCCGCCTCCGCCAGGTTCACGCGCCAGCTCACCACCACCCGCAACGAGCTCATGATCAACGACATCGTCGGGAGCGGCGTCTCCGGCATCCTCTATAAGTGGGTCAACTACGGGCGCGGCTGGCGCCCCCGCTGGTTCGTCCTCCATGACGGCATTATGTCCTACTACAAGATCCACGGCCCCGATAAGCTCATCCTCAACCGCGAGGTCGAGACCGGGGCTATGGTTATTGGCGACGAGTCGCTCCGCCGCATCAACAGCCACCGTAATTGTCCATCCCGCAACCGCAAACCAGTCAGCCAAATCCATCTCATGGTCTGTTCAGTGCGAGAGAACAGTTCAGATGAGAGGAGGTTTTCAGTGTGCACCGGAACAAAGAAGAGACTGCATCTGAGGGCGGAGAGCGGAGAAGATAGAGCCAAGTGGATGGAGGCAATGAAGGCGGTCAAGGACTTGTTTCCGCGCCTGCCCAATGCAGAAGCCGTGTCATCCATCACCTCTGTTCTCATTTCCACCGAGAAGCTGAGAGATCGGCTTTTAATGGAGGGCTTGGATGAGGCTGCTATTAAGGATAGTGAGAATATCATGAAGTCCGAGTTCTCTCATTTGCAGAAGCATATTATGGCCCTCAAGCAGAAGCAGGTGCTGCTAATGGACACGCTGCGCCATCTAGAGGAAGAGAAGGTTGACTTGGAGAACGCACTTATTGATGACCAAAAACAATCAAAAGATGAAACTGCTCCAGATCCCAGGCTATCAACCCAAGAGAAATATAGCGAAGAAGGAAGTGGTGATGATTCTTCTGAAGAGCAGGACAGGAACGATCACTCAGACGATGAAGACGATGCATTCTACGACACATGTGATGATATTCTATCAACAGCAGATTCTGACAACCCGAGATCCAGCAATGACTCTGAATGTGATGAGACTAGTCCAACCGGTGAAGAAAAATCAGCCATTGCATCCGTTGAATTCAACTATCCTCAAATCAAGCGACGGAAGAAGTTGCCTGATCCTGTTGAGAAAGAGAGCAGCGTGAGTCTGTGGTCAATCATAAAAGACAACATTGGGAAGGATCTCACAAAAGTTTGTCTTCCAGTTTACTTTAATGAACCTCTCTCCTCACTGCAGAAATGTTTTGAGGATGTTGAGTACTCTTATCTTCTAGACAAAGCATATGAATGGGTTTCGGGGTATGCTAGCACCAATGGTAGAAGTTGCAAACCGTTTAATCCACTGTTGGGGGAGACATATGAAGCAGATTATCAAGACAAAGGCATTCGCTTTATCTCTGAGAAGGTCAGTCATCACCCCATGATTGTTGCATGCCATTGTGAGGGAAATGGCTGGAAATTTTGGGCTGACAGCAATTTAAAAAGTAAATTTTGGGGTCGTTCAATCCAGCTTGATCCCGTTGGTGTATTGACAGTAGAATTTGATGATGGAGAAGTCTTTCATTGGAGCAAGGTAACAACATCCATTTACAACCTCATTTTAGGAAAACTCTACTGTGACCATTATGGTACAATGCGTGTAGAGGGGAACCGTGACTATTTATGTAAGATGAAATTCAAGGAGCAGTCAATCATTGATAGAAACCCTCACCAGATTCACGGCGTGGTGGAAGATAAGAAAGGTAAAACAGTGGCAAGTATATTTGGGAAGTGGGATGAGAGCTTGCATTACGTAATTGGAGGGAATTCTGGGAAAGGAAAAGGGTTCAATGGGTCATCAAAACCACTTCTTTTGTGGAAGAGGAACCCTTTACCCGAGTACCAGACAAGATATAACCTCACAGAGTTTGCTATTACACTCAATGAAATCACACCTGGATTAAAGGAGAAGTTGCCACCGACAGATTCAAGGCTAAGACCTGATCAAAGGTGTTTGGAGAATGGACAGCATGAAATGGCCAATTCTGAAAAGATGCGGCTGGAACAAAGACAGCGGCAGGCACGAAAGATGCAAGAGAAGGGTTGGAAACCAAGGTGGTTTGCCAAGGAAAAAGGCAGCAACACTTACCGTTATGTTGGAGGGTACTGGGAGACCAGGGAAAAGGGAAACTGGGAATCTTGTCCTGACATTTTTGGTCAATTCTCATCCGATACTTCTGATTTTAACCCAACTCCATAA 2337 0.4831 MNSFRSSSHHRTKPNPAARIPRQPGISSDDKQMPPLTAPTPAFRFRSLSSCAHNRPTSSSAANAVKRSASARFTRQLTTTRNELMINDIVGSGVSGILYKWVNYGRGWRPRWFVLHDGIMSYYKIHGPDKLILNREVETGAMVIGDESLRRINSHRNCPSRNRKPVSQIHLMVCSVRENSSDERRFSVCTGTKKRLHLRAESGEDRAKWMEAMKAVKDLFPRLPNAEAVSSITSVLISTEKLRDRLLMEGLDEAAIKDSENIMKSEFSHLQKHIMALKQKQVLLMDTLRHLEEEKVDLENALIDDQKQSKDETAPDPRLSTQEKYSEEGSGDDSSEEQDRNDHSDDEDDAFYDTCDDILSTADSDNPRSSNDSECDETSPTGEEKSAIASVEFNYPQIKRRKKLPDPVEKESSVSLWSIIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEDVEYSYLLDKAYEWVSGYASTNGRSCKPFNPLLGETYEADYQDKGIRFISEKVSHHPMIVACHCEGNGWKFWADSNLKSKFWGRSIQLDPVGVLTVEFDDGEVFHWSKVTTSIYNLILGKLYCDHYGTMRVEGNRDYLCKMKFKEQSIIDRNPHQIHGVVEDKKGKTVASIFGKWDESLHYVIGGNSGKGKGFNGSSKPLLLWKRNPLPEYQTRYNLTEFAITLNEITPGLKEKLPPTDSRLRPDQRCLENGQHEMANSEKMRLEQRQRQARKMQEKGWKPRWFAKEKGSNTYRYVGGYWETREKGNWESCPDIFGQFSSDTSDFNPTP 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0720 778 MobiDBLite consensus disorder prediction 359 376 - -
Aed10g0720 778 SUPERFAMILY PH domain-like 95 229 - -
Aed10g0720 778 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 28 769 - -
Aed10g0720 778 MobiDBLite consensus disorder prediction 302 390 - -
Aed10g0720 778 MobiDBLite consensus disorder prediction 302 331 - -
Aed10g0720 778 Pfam Pleckstrin homology domain 99 214 - -
Aed10g0720 778 MobiDBLite consensus disorder prediction 332 354 - -
Aed10g0720 778 Gene3D - 695 760 - -
Aed10g0720 778 ProSiteProfiles PH domain profile. 91 218 IPR001849 -
Aed10g0720 778 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 28 769 IPR000648 GO:0008289
Aed10g0720 778 Pfam Oxysterol-binding protein 415 753 IPR000648 GO:0008289
Aed10g0720 778 Gene3D - 92 219 IPR011993 -
Aed10g0720 778 Coils Coil 274 308 - -
Aed10g0720 778 SUPERFAMILY Oxysterol-binding protein-like 410 768 IPR037239 -
Aed10g0720 778 SMART PH_update 92 220 IPR001849 -
Aed10g0720 778 Coils Coil 703 726 - -
Aed10g0720 778 MobiDBLite consensus disorder prediction 1 39 - -
Aed10g0720 778 Gene3D - 484 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0720 Aed-Chr10 5895459 5901863 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0720 K20456 - gmx:100781218 1298.49