Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0716 ATGTACTCGAGCAATTTGATCGGCTTCATCTTAGCCGTCGTCTCCAGCGCTTTCATCGGCTCCAGCTTCATCATCAAGAAAAAAGGCCTCCAACGTGCCACTCTCAACGGCTCACGTGCCAGTGGCGGAGGCTATGGTTACCTGCTGCAACCTCTCTGGTGGATCGGAATGGTCACCATGATTGTCGGAGAGATAGCGAATTTTGTGGCGTACGTTTATGCCCCGGCGGTGCTTGTCACGCCGCTTGGTGCTATGAGTATTATTGTTAGTGCTGTGTTGGCGCATTTCATGTTGAACGAGAAGCTGCAGAAAATGGGCATGCTGGGGTGTGTTCTGTGCATTGTGGGGTCCACTGTGATTGTGCTCCATGCGCCTCAAGAGAAGTCTCTTAGTTCTGTAGAAGAAATATGGCAGTTGGCACTTCAACCAGCATTTCTATCGTACACTGCATCGGCGATCGCTGTAGTGTTCTTTTTGATCTTGTATTGTGCTCCTCGCTATGGCCAGACTAATATTTTTGTTTATATTGGAATATGCTCCATAATTGGATCCTTGACTGTCATGAGCATAAAAGCTATTGGCATTGCTATAAAACTTACAATTGAGGGTGCCGACCAGTTTCTTCAGTTTCAGACATGGATTTTTACGATGGTTGCTATTTCCTGCGTCGTTACTCAGTTAAATTATCTTAATATGGTCTATCTGTATAGTCCTTTGTCTCCAAAAGTATCATGGTATATCCAAGGCAATGGCGAACCTTGGAAACAGAAAGAGGAAGATAGACCACCCTTTAATTTAATTACAGTTATCCGGCAAGACCATTTCAAGTGA 831 0.4501 MYSSNLIGFILAVVSSAFIGSSFIIKKKGLQRATLNGSRASGGGYGYLLQPLWWIGMVTMIVGEIANFVAYVYAPAVLVTPLGAMSIIVSAVLAHFMLNEKLQKMGMLGCVLCIVGSTVIVLHAPQEKSLSSVEEIWQLALQPAFLSYTASAIAVVFFLILYCAPRYGQTNIFVYIGICSIIGSLTVMSIKAIGIAIKLTIEGADQFLQFQTWIFTMVAISCVVTQLNYLNMVYLYSPLSPKVSWYIQGNGEPWKQKEEDRPPFNLITVIRQDHFK 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0716 276 PANTHER MAGNESIUM TRANSPORTER-RELATED 1 233 - -
Aed10g0716 276 PANTHER MAGNESIUM TRANSPORTER-RELATED 235 276 - -
Aed10g0716 276 PANTHER UNCHARACTERIZED 235 276 IPR008521 GO:0015095|GO:0015693|GO:0016021
Aed10g0716 276 PANTHER UNCHARACTERIZED 1 233 IPR008521 GO:0015095|GO:0015693|GO:0016021
Aed10g0716 276 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 124 - -
Aed10g0716 276 Pfam Magnesium transporter NIPA 5 232 IPR008521 GO:0015095|GO:0015693|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0716 Aed-Chr10 5831818 5836493 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0716 K22733 - gmx:100810226 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0716 10 5831818 5836493 Aed10g0716 10 5831818 5836493 ECH
Aed5g2173 5 23878415 23882047 Aed10g0716 10 5831818 5836493 PCT