Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0698 ATGAATTCAAAGATGAAGTCAGGGAAGTTGGGATTTTTGGTTCTAGTAGTGATCTTGTTCAACTCCTCTACTTGTTCAGCTTGGTTTGGTAGTAAACATAAAAGTTCAAGTTCAAGTGGAAGGAGCTCCTTTCGTCCATACGAATCTTCGTCGTCATCTTCTTCATCACCGTCACCCTACATACTAAACCGTTTTCGTGCTGGCTCATCCGTCGTGTTCCCGGTTCATGGCAATGTTTACCCTGTTGGGTTTTATAATGTTACTATCAACATCGGGCAACCACCCAGGCCATATTTTCTTGATATTGACACTGGTAGCGACCTCACGTGGCTTCAATGTGACGCCCCTTGTTCCCGTTGCTCTCAGACACCACATCCACTATACAGACCCAGCAATGACATAGTGGCCTGCAGGCATGCCCTCTGTGCATCCTTGCACCACACTGATAACTACGAGTGCGAAGTCCCACATCAGTGTGACTACGAAGTTGAGTATGCAGATCATTACTCATCCCTTGGTGTGCTTCTCCATGATGTCTACACTCTCAACTTTACAAATGGAGTCCAACTCAAAGTTCGCATGGCACTTGGGGGAAAAACCAGCTTGACATCACAGCTGAATAGTCAGGGTTTGGTGAGAAATGTGATTGGACACTGTTTGAGTGCACAAGGAGGAGGCTATATCTTCTTTGGAGATGTTTATGATTCTTCTAGACTAACTTGGACTTCAATGTCATCCAGAGATTTCAAACATTACTCAGCAGCAGGGGCAGCTGAACTCCTTTTTGGAGGGAAGAAGAGTGGGGTTGGAAGTCTTCATGCTGTTTTTGACACTGGGAGTTCTTACACCTATTTCAACTCTTATGCTTACCAAGCACTAATTTCTTGGTTGAGGAAGGAAGCAGGCGGAAAGTCCCTAAAAGAAGCACATGATGATAAAACTCTCCCTCTATGTTGGCGTGGTAGAAGACCTTTCAGAAGCGTATATGAAGTGAGAAAGTACTTCAAGTCAATAGTGCTTAGTTTCACTACCAATGGGAGAAGCAAAGCTCAGTTTGAAATGCCTCCTGAAGCATATCTCATAGTATCTAACATTGGAAATGTTTGCTTGGGCATTCTAAACGGCTCTGAAGTAGGGATGGGGGATCTGAACCTAATTGGAGACATATCCATGCTAAACAAGGTGATGGTATTTGACAACGACAAGCAATTGATTGGTTGGACACCGGCAGATTGTGACCAGGTTCCAAAATCCAGAGCTGTCAGCATGTGA 1272 0.4442 MNSKMKSGKLGFLVLVVILFNSSTCSAWFGSKHKSSSSSGRSSFRPYESSSSSSSSPSPYILNRFRAGSSVVFPVHGNVYPVGFYNVTINIGQPPRPYFLDIDTGSDLTWLQCDAPCSRCSQTPHPLYRPSNDIVACRHALCASLHHTDNYECEVPHQCDYEVEYADHYSSLGVLLHDVYTLNFTNGVQLKVRMALGGKTSLTSQLNSQGLVRNVIGHCLSAQGGGYIFFGDVYDSSRLTWTSMSSRDFKHYSAAGAAELLFGGKKSGVGSLHAVFDTGSSYTYFNSYAYQALISWLRKEAGGKSLKEAHDDKTLPLCWRGRRPFRSVYEVRKYFKSIVLSFTTNGRSKAQFEMPPEAYLIVSNIGNVCLGILNGSEVGMGDLNLIGDISMLNKVMVFDNDKQLIGWTPADCDQVPKSRAVSM 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0698 423 PRINTS Pepsin (A1) aspartic protease family signature 274 285 IPR001461 GO:0004190|GO:0006508
Aed10g0698 423 PRINTS Pepsin (A1) aspartic protease family signature 384 399 IPR001461 GO:0004190|GO:0006508
Aed10g0698 423 PRINTS Pepsin (A1) aspartic protease family signature 91 111 IPR001461 GO:0004190|GO:0006508
Aed10g0698 423 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 6 197 - -
Aed10g0698 423 SUPERFAMILY Acid proteases 77 415 IPR021109 -
Aed10g0698 423 ProSiteProfiles Peptidase family A1 domain profile. 85 408 IPR033121 -
Aed10g0698 423 Gene3D Acid Proteases 235 416 IPR021109 -
Aed10g0698 423 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 100 111 IPR001969 GO:0004190|GO:0006508
Aed10g0698 423 Gene3D Acid Proteases 196 232 IPR021109 -
Aed10g0698 423 PANTHER ASPARTYL PROTEASES 198 417 IPR001461 GO:0004190|GO:0006508
Aed10g0698 423 PANTHER ASPARTYL PROTEASES 6 197 IPR001461 GO:0004190|GO:0006508
Aed10g0698 423 Pfam Xylanase inhibitor N-terminal 85 193 IPR032861 -
Aed10g0698 423 Gene3D Acid Proteases 60 195 IPR021109 -
Aed10g0698 423 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 198 417 - -
Aed10g0698 423 MobiDBLite consensus disorder prediction 30 58 - -
Aed10g0698 423 Pfam Xylanase inhibitor C-terminal 270 408 IPR032799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0698 Aed-Chr10 5693155 5697120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0698 69 418 Miscellaneous Gene Families AT1G44130 48.670 4.80e-129 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0698 - - gmx:100819172 737.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0698 10 5693155 5697120 Aed10g0698 10 5693155 5697120 ECH