Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0687 ATGGTAGAATATGCCTCGACAACAAACCTTGAATACAGTCGAGTTTATGACGTTGAATGCTCCGACGATGATGGCCGAGTTAAACGAACAGGGAACGTTTGGACTACAAGCTCCCACATAATAACAGCTGTGGTAGGATCTGGGGTGCTATCCTTAGCTTGGGCAATAGCTCAGATGGGTTGGATTGCTGGTCCTGCAGTGATGATCTTATTCAGCATTGTCACTTTGTATACTTCATCCTTCCTAGCTGATTGTTATCGTACTGGCGACCCCTTATTCAGGAAGAGAAATTATACTTTCATGGACGCAGTTAGCACCATTCTGGGTGGGCACAGTGTTACGTTCTGTGGGATAGTTCAGTACTTGAATCTTTTCGGAAGTGCAATTGGATACACAATTGCGGCTTCCCTTAGCATGATGGCAATCCAAAGGTCTCACTGTATCATCCAATCCTCTGATGGAGAAAACCAATGTCAGATTTCAAATACCCCATACATGATCGGTTTTGGTGCAGTGCAAATTTTCTTTTCTCAAATTCCAGATTTTCACAACATGTCTTGGCTCTCAATGGTTGCTTCAGTCATGTCTTTCACCTATTCCATAATTGGTCTCGTTCTTGGAATTTCCATAATTGCAGAAACGGGAACTTTCAAGGGTAGCCTCACAGGAATAAGCATTGGAACTGTGACAAAGGCCCAAAAAGTATGGGGTGTTTTCCAAGCTCTTGGTAACATAGCCTTCGCCTATTCATATTCTTTCGTTCTCCTTGAAATTCAGGATACCATCAAATCTCCGCCATCTGAAGTAAAAACAATGAAGAAGGCTGCAAAGTTAAGTATTCTAGTGACCACAACATTTTATATGCTTTGTGGCTGCATAGGCTATGCTGCTTTTGGAGATTCAGCACCTGGGAACCTGCTTGCTGGATTTGGTTTCCATAAACTGTATTGGCTTGTAGATATTGCTAATGCTGCTATTGTGATTCACCTTGTGGGTGCATACCAAGTGTATGCTCAACCCCTCTTTGCCTACGTCGAGAAGGAGTCAGCAAAAAGATGGCCAAAAATTGAGAAGGACTTCAAAGTGTCAATTCCTGGTTTGCAACCCTACAATCAGAGCATATTTAACCTAGTTTGGAGGACAGTGTTTGTGATCATAACCACTGGTATATCAATGTTGCTTCCATTCTTCAACGATATTTTGGGAGTGATTGGAGCATTGGGATTTTGGCCTTTAACTGTGTACTTTCCTGTGGAGATGTATATCATTCAAAAGAAGATCCCAAAATGGAGTATGAAATGGGTTTCTCTGCAATTGATGAGTGTGGTCTGCCTCATAGTCACAATTGTGGCTGGTCTTGGTTCAGTAGTTGGTGTCATTCTTGACCTCAAGCAATACAATCCATTAGGTTCATAA 1416 0.4209 MVEYASTTNLEYSRVYDVECSDDDGRVKRTGNVWTTSSHIITAVVGSGVLSLAWAIAQMGWIAGPAVMILFSIVTLYTSSFLADCYRTGDPLFRKRNYTFMDAVSTILGGHSVTFCGIVQYLNLFGSAIGYTIAASLSMMAIQRSHCIIQSSDGENQCQISNTPYMIGFGAVQIFFSQIPDFHNMSWLSMVASVMSFTYSIIGLVLGISIIAETGTFKGSLTGISIGTVTKAQKVWGVFQALGNIAFAYSYSFVLLEIQDTIKSPPSEVKTMKKAAKLSILVTTTFYMLCGCIGYAAFGDSAPGNLLAGFGFHKLYWLVDIANAAIVIHLVGAYQVYAQPLFAYVEKESAKRWPKIEKDFKVSIPGLQPYNQSIFNLVWRTVFVIITTGISMLLPFFNDILGVIGALGFWPLTVYFPVEMYIIQKKIPKWSMKWVSLQLMSVVCLIVTIVAGLGSVVGVILDLKQYNPLGS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0687 471 Pfam Transmembrane amino acid transporter protein 30 461 IPR013057 -
Aed10g0687 471 PANTHER OS05G0424000 PROTEIN-RELATED 17 466 - -
Aed10g0687 471 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 17 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0687 Aed-Chr10 5626962 5632738 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0687 19 471 Organic Solute Cotransporters AT5G09220 66.740 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0687 K24917 - gmx:100817699 843.573