Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0686 ATGGTTGAAAAATCTTCCAGAAACAACCTTGGCATGGAGGGTTACTCCATAGATGGTGTTTCTTCACAAATCGACTCCAAATTATATGACGATGATGGCCGTATTAAACGAACAGGGACCGTTTGGACAACAAGCTCGCACATAATAACAGCTGTGGTGGGCTCTGGTGTTCTGTCTTTGGCATGGGCCATGGCCCAAATAGGGTGGGTTGCTGGGCCTACAGTTATGATATTCTTCAGTGTCGTTACGCTCTATACGTCGTCGATTCAGGCTGATTGTTATCGCTGTGGTGACCCCGTTACCGGGAAGAGAAACCACACTTTCATGGAAGCAGTTAGCAACATTCTCGGCGGGTATTATTATTTGTTTTGTGGGATAGTTCAGTACTTAAATCTTTACGGAACTGCCGTAGGATACACAATTGCGGCTTCTATTAGCATGATGGCGATAAAAAGGTCCAATTGTTTCCATTCTTCAGGCGGAGAAAATCCATGCCACATTTCAAGCAACCCATACATGATCAGTTTTGGCATAATCCAAATTGTATTTTCTCAAATTCCAGATTTTGATAAAACATGGTGGCTCTCCATAGTTGCAGCAATCATGTCTTTTGTCTATTCCACTATTGGCCTCGCTCTTGGAATTGCAAAAGTTGCAGAAACGGGTACTTTCAAGGGTAGTCTCACAGGAGTAAGGATTGGAAGTGTTACAGAGGCCCAAAAAGATACCATAAAGTCTCCACCAACTGAAGCAAAGACAATGAAGAAGTCTGCTAGGATAAGTATTGGAGTAACCACAACATTTTATATGCTATGTGGCTTCATGGGTTATGCTGCTTTTGGAGATTCAGCACCTGGGAACCTTCTCACTGGATTTGGTTTTTATAACCCTTATTGGCTCATAGATATTGCCAATGCTGCTATTGTAATTCACCTTGTGGGAGCATACCAAGTTTATGCCCAGCCCATTTTTGCTATTGTTGAGAAATGGGCTTCAAAAAGATGGCCCGGAGTTGACACTTTATACAAAGTTCCAATTCCTGGGTTCTCACCTTACAATCTAAGCCCGTTTAGATTAGTCTGGAGAACGGTGTTTGTCATCATAACCACTTTTGTATCAATGTTGATTCCATTCTTCAATGATGTTTTGGGACTTCTTGGAGCATTTGGGTTTTGGCCTTTGAGTGTTTTTTTCCCAGTGCAGATGAGTATCAAACAAAAGAGGACTCCAAGGTGGAGTGGTAGATGGATTGGTTTGCAAATCTTAAGTGTTGTTTGTCTCATAGTATCAGTTGCTGCTGCTGTTGGCTCAATTGCCAGTATCGTCCTTGACCTGCAGAAATACAAACCTTTTAAAGTAGAATATTAA 1368 0.4189 MVEKSSRNNLGMEGYSIDGVSSQIDSKLYDDDGRIKRTGTVWTTSSHIITAVVGSGVLSLAWAMAQIGWVAGPTVMIFFSVVTLYTSSIQADCYRCGDPVTGKRNHTFMEAVSNILGGYYYLFCGIVQYLNLYGTAVGYTIAASISMMAIKRSNCFHSSGGENPCHISSNPYMISFGIIQIVFSQIPDFDKTWWLSIVAAIMSFVYSTIGLALGIAKVAETGTFKGSLTGVRIGSVTEAQKDTIKSPPTEAKTMKKSARISIGVTTTFYMLCGFMGYAAFGDSAPGNLLTGFGFYNPYWLIDIANAAIVIHLVGAYQVYAQPIFAIVEKWASKRWPGVDTLYKVPIPGFSPYNLSPFRLVWRTVFVIITTFVSMLIPFFNDVLGLLGAFGFWPLSVFFPVQMSIKQKRTPRWSGRWIGLQILSVVCLIVSVAAAVGSIASIVLDLQKYKPFKVEY 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0686 455 PANTHER OS05G0424000 PROTEIN-RELATED 12 241 - -
Aed10g0686 455 PANTHER OS05G0424000 PROTEIN-RELATED 241 449 - -
Aed10g0686 455 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 12 241 - -
Aed10g0686 455 Pfam Transmembrane amino acid transporter protein 242 442 IPR013057 -
Aed10g0686 455 Pfam Transmembrane amino acid transporter protein 37 220 IPR013057 -
Aed10g0686 455 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 241 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0686 Aed-Chr10 5618273 5622034 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0686 16 455 Organic Solute Cotransporters AT5G09220 63.966 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0686 K24917 - gmx:100813602 812.757