Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0650 ATGAATTCTCAAATCGCAAACACCATCGACATTAGACTCCAACTCCCAAAACCCTTCTTCCCTCGCAAAACCCCTTTTCCCCAATTTCCCCACTCTTCACCTCGCTTTTTCACTACCACATTCTCCACTCGCAACTTCACAAAACGATGCAAACTCAGAATCACCGCTTCCAATTCTCCTTCCGACACAGCCACTCCCAACCAAGAACAAGAACAAGAACAAGACCAAGACGCCGAATCCGCGCAACTATTCGAGCAACTGAAGGAGGCTGAAAGGAAGCGGATGAATGAGTTGGAGGAGTTTGACAAGAAAGCGAATGTGCAGTTAGAGAGGCAGCTTGTGATGGCTTCTTCGTGGAGCAGAGTTTTGTTGACTTTGCGTGGAAAACTGAAGGGAACTGAGTTGGATCCTGAGAATTCACACAGGATTGATTACAGTGATTTTTTGAGACTTCTTGACTCTAATAACGTCCAGTTTATGGAGTACTCTAATTACGGTCAAACAATATCAGTTATTCTACCATATTACAAAAATGGGAAACCGACAGGAACTGAAGGGAATCCTAAGGATATTATTTTTCGGCGTCATCCAGTTAATCGAATGCCAATTGATAGTTGGAATGATGTTTGGAGAAAGCTACATCAGCAAATTGTAAATGTTGATGTCATTAATGTGGATGCCGTGCCTGCTGAAATATACTCAACTATTGCAGTTGCAGTCATATGGTCTATGCGTCTTGCTCTGGCTGTTGGATTTTACGTGTGGATTGATAATTTGATGAGACCGATATATGCGAAGCTGATACCTTGTGATTTGGGAACTCCTAGCCAACAAAATAGGCAGCCACTCAAAAGTCGTGCACTTGGATCTCTAGGCCAGAGTCGGGCTAAATTTATATCTGCAGAAGAAAGAACTGGTGTTACATTTGATGATTTTGCTGGCCAGGAATATATAAAGAAAGAACTACAAGAGATTGTCCGAATTTTAAAGAATGATGAGGAGTTTCAAGACAAAGGAATTTATTGTCCAAAAGGTGTACTTCTTCATGGGCCTCCTGGAACTGGTAAAACTCTACTGGCTAAAGCCATCGCAGGTGAAGCAGGGTTGCCTTTTTTTGCAGCTAATGGCACAGATTTTGTAGAGATGTTTGTAGGGGTTGCTGCATCCCGTGTTAAAGACCTTTTTGCAAATGCAAGATCATTTTCACCTTCTATAATCTTTATTGATGAGATAGATGCTATTGGTAGCAAGCGTGGAGGACCTGATATTGGTGGAGGAGGTGCTGAAAGGGAACAAGGTTTACTTCAGATACTGACTGAGATGGATGGATTCAAAGTTTCCACAGCACAGGTGCTCGTGATAGGTGCCACAAATAGATTGGATATTCTTGATCCTGCTTTATTGAGAAAGGGTCGTTTTGACAAGATCATTAGAGTTGGTTTGCCATCCGAGGATGGAAGATTTGCCATTTTGAAGGTGCATGCTAGGAATAAATTTTTTCGCTCTGAAGAGGAAAAGGAGACTCTACTTAAGGAAATTGCTGAACTGACAGACGATTTTACTGGGGCAGAGCTACAAAATATACTGAATGAAGCTGGAATTTTGACAGCCAGGAAGGATTTGGACTACATTGGGCGAGATGAGCTGCTTGAGGCATTAAAAAGGCAAAAGGGAACATTTGAAACAGGGCAAGAGGATAGTACTGCAATTCCTGAAGAATTAAAACTGAGATTGGCATACAGAGAAGCAGCTGTTGCTGTTCTTGCATGTTATTTTCCTGAGCCCCACCGTCCTTTTGTTGAGACTGATATAAATTCTATCCGCAGCCAGCCAAATATGCAGTATGCTGAAATTTCTGGCCAAGTTTTTGCAAGGAAATCAGATTACGTAAACTCTATAGTGCGTGCTTGCGCTCCAAGAGTAATTGAGGAGGAGATGTTTGGGATTGACAACTTGTGTTGGATCTCTGCAAAGGCAACATTAGAAGCTTCAAGGCGTGCAGAGTTTTTAATTCTGCAGACAGGCATGACTGCTTTTGGGAAAGCATATTACAAAAACTATAGTGATCTTATGCCCAATCTTGCAATGAAGCTTGAAGCAATTCGAGATGAGTATATGCGTTATGCTACAGAGCAGTGCTTATCTGTGCTAAAAGAATACCATTTGGCTGTTGAGACAATCACAGATATTTTGCTTGAAAAGGGGCAAATCAAAGCTGAGGAGATTTGGGACATTTATAAGAGTGCTCCTCGTGTAGCTCAGCCTCCTGTCAGTCCAGTTGATGAATATGGATCACTAATTTATGCTGGACGATGGGGAATCCATGGGATCAGTCTTCCCGGAAGGGTTACATTTGCGCCAGGCAATGTTGGATTTTCGACCTTTGGTGCACCTCGGCCTACAGAGACACAAATTGTTAGTGATGAAACTTGGAAACTAGTAGATGATATCTGGGATAAAAAGGTTCAAAACATTAAAGATGAAGCTTCAAAGGTGATTGAAGAAGAGAAGGAAAAGCCACAACTTTTGATGGCGAGCCATTTTCTTTAA 2550 0.4192 MNSQIANTIDIRLQLPKPFFPRKTPFPQFPHSSPRFFTTTFSTRNFTKRCKLRITASNSPSDTATPNQEQEQEQDQDAESAQLFEQLKEAERKRMNELEEFDKKANVQLERQLVMASSWSRVLLTLRGKLKGTELDPENSHRIDYSDFLRLLDSNNVQFMEYSNYGQTISVILPYYKNGKPTGTEGNPKDIIFRRHPVNRMPIDSWNDVWRKLHQQIVNVDVINVDAVPAEIYSTIAVAVIWSMRLALAVGFYVWIDNLMRPIYAKLIPCDLGTPSQQNRQPLKSRALGSLGQSRAKFISAEERTGVTFDDFAGQEYIKKELQEIVRILKNDEEFQDKGIYCPKGVLLHGPPGTGKTLLAKAIAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFANARSFSPSIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTAQVLVIGATNRLDILDPALLRKGRFDKIIRVGLPSEDGRFAILKVHARNKFFRSEEEKETLLKEIAELTDDFTGAELQNILNEAGILTARKDLDYIGRDELLEALKRQKGTFETGQEDSTAIPEELKLRLAYREAAVAVLACYFPEPHRPFVETDINSIRSQPNMQYAEISGQVFARKSDYVNSIVRACAPRVIEEEMFGIDNLCWISAKATLEASRRAEFLILQTGMTAFGKAYYKNYSDLMPNLAMKLEAIRDEYMRYATEQCLSVLKEYHLAVETITDILLEKGQIKAEEIWDIYKSAPRVAQPPVSPVDEYGSLIYAGRWGIHGISLPGRVTFAPGNVGFSTFGAPRPTETQIVSDETWKLVDDIWDKKVQNIKDEASKVIEEEKEKPQLLMASHFL 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0650 849 Coils Coil 499 526 - -
Aed10g0650 849 Gene3D Peptidase M41 564 751 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Aed10g0650 849 SUPERFAMILY FtsH protease domain-like 570 752 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Aed10g0650 849 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 302 555 IPR027417 -
Aed10g0650 849 Gene3D - 291 480 IPR027417 -
Aed10g0650 849 ProSitePatterns AAA-protein family signature. 451 469 IPR003960 GO:0005524|GO:0016887
Aed10g0650 849 MobiDBLite consensus disorder prediction 56 71 - -
Aed10g0650 849 CDD AAA 313 481 - -
Aed10g0650 849 PANTHER METALLOPROTEASE M41 FTSH 41 818 - -
Aed10g0650 849 Gene3D - 482 562 - -
Aed10g0650 849 PANTHER INACTIVE ATP-DEPENDENT ZINC METALLOPROTEASE FTSHI 4, CHLOROPLASTIC-RELATED 41 818 - -
Aed10g0650 849 MobiDBLite consensus disorder prediction 56 79 - -
Aed10g0650 849 Pfam AAA+ lid domain 510 550 IPR041569 -
Aed10g0650 849 Pfam ATPase family associated with various cellular activities (AAA) 346 480 IPR003959 GO:0005524|GO:0016887
Aed10g0650 849 SMART AAA_5 342 483 IPR003593 -
Aed10g0650 849 Coils Coil 73 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0650 Aed-Chr10 5247648 5257792 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0650 119 574 Miscellaneous Gene Families AT3G02450 36.819 4.60e-68 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0650 - - gmx:100804743 1561.58