Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0637 ATGGCGACAAAAGCCTTGTCCTTCGCTCTGTCTCTCAATGACCTCACCAGCAACCGTTTCTCTTCCAATACGCCACACGCTGCTGCCAAAGTTTCCGTCTTTACCGTCAGATGCTCTTCGGGTAGTGGAGAGAGGCCTTGGAAGAATTCAGATGCTAGACTTGTGCTTGAAGATGGTTCGATTTGGAGTGCAAAGTCTTTTGGTGCTTCGGGGACACAAGTTGGCGAAGTTGTTTTCAATACATCATTGACAGGGTATCAAGAAATTTTGACAGATCCTAGCTATGCTGGCCAGTTTGTGCTCATGACAAACCCGCACATTGGGAATACTGGCATAAATTTTGATGATGAGGAATCAATACAGTGTTTCCTTGCTGGTCTTGTAATTAGAAGTTTGAGTATCAGTACCTCTAACTGGAGATGTGCGAAGGATCTGGGTGATTATTTAGCTGAAAGGAATATCATGGGAATTTATGATGTTGATACTCGTGCAATCACACGCAGATTGCGGCAAGATGGCAGTCTTATTGGTGTCTTGAGTACTGACAATTCCAAAACGGATGGGGAACTTGTTCAGATGTCTAAGTCATGGGACATTGTTGGTAAGGATCTAATAAGCGGAGTATCGTGCAAAACTCCACATGAATGGGTTGATAAAACAAAGCAACAATGGGAGTTTAGTTCCAGTAGAGTGCCTGGAGAGGCTTTCCATGTAGTTGCTTATGATTTTGGAATCAAGCATAATATACTTAGGCGCCTAGCATCTTATGGCTGCAAAATCACTGTTGTGCCATGTACATGGCCAGCATCAGAAACTTTGAAGATGAAACCAGATGGTGTAATTTTCAGCAATGGCCCCGGAGATCCGTCTGCTGTTCCTTATGCTGTTGAAACAGTAAAGAATATTATCGGAAAGGTCCCTGTTTTTGGAATTTGCATGGGCCATCAATTGCTAGGCCAGGCTTTAGGAGGTAAAACCTTCAAGATGAAATTTGGTCACCATGGAGGAAATCATCCTGTCCGTAACCTTCGATCTGGCCATGTTGAGATTAGTGCTCAGAACCACAATTATGCTGTTGATCCTGCCACACTGCCGGAAGGAGTTGAGGTTACTCATATCAATCTCAATGATGGAAGTTGTGCTGGTCTTGCTTTCCCTGCTCAACAACTTATGTCTCTTCAATACCACCCTGAAGCATCCCCTGGACCTCATGATTCTGACTATGCTTTTAGGGAGTTTATAGAGCTAATGAGGCAAGGAAAAAACAGAACAAAGGGAAGTCTACACCAGCTATCAGCGGCACATGCTTTGGATGCATAG 1320 0.4394 MATKALSFALSLNDLTSNRFSSNTPHAAAKVSVFTVRCSSGSGERPWKNSDARLVLEDGSIWSAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGINFDDEESIQCFLAGLVIRSLSISTSNWRCAKDLGDYLAERNIMGIYDVDTRAITRRLRQDGSLIGVLSTDNSKTDGELVQMSKSWDIVGKDLISGVSCKTPHEWVDKTKQQWEFSSSRVPGEAFHVVAYDFGIKHNILRRLASYGCKITVVPCTWPASETLKMKPDGVIFSNGPGDPSAVPYAVETVKNIIGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNLRSGHVEISAQNHNYAVDPATLPEGVEVTHINLNDGSCAGLAFPAQQLMSLQYHPEASPGPHDSDYAFREFIELMRQGKNRTKGSLHQLSAAHALDA 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0637 439 Gene3D - 50 198 IPR036480 -
Aed10g0637 439 TIGRFAM CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 52 418 IPR006274 GO:0004088|GO:0006207|GO:0006541
Aed10g0637 439 SMART CPSase_sm_chain_2 50 180 IPR002474 -
Aed10g0637 439 SUPERFAMILY Class I glutamine amidotransferase-like 226 420 IPR029062 -
Aed10g0637 439 PANTHER CARBAMOYL-PHOSPHATE SYNTHASE ARGININE-SPECIFIC SMALL CHAIN 31 419 - -
Aed10g0637 439 Gene3D - 199 421 IPR029062 -
Aed10g0637 439 PANTHER CARBAMOYLTRANSFERASE FAMILY MEMBER 31 419 - -
Aed10g0637 439 PRINTS Glutamine amidotransferase superfamily signature 280 289 - -
Aed10g0637 439 PRINTS Glutamine amidotransferase superfamily signature 392 405 - -
Aed10g0637 439 PRINTS Glutamine amidotransferase superfamily signature 307 318 - -
Aed10g0637 439 Pfam Glutamine amidotransferase class-I 241 415 IPR017926 -
Aed10g0637 439 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 324 341 - -
Aed10g0637 439 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 277 291 - -
Aed10g0637 439 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 238 252 - -
Aed10g0637 439 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 307 323 - -
Aed10g0637 439 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 349 360 - -
Aed10g0637 439 SUPERFAMILY Carbamoyl phosphate synthetase, small subunit N-terminal domain 51 194 IPR036480 -
Aed10g0637 439 CDD GATase1_CPSase 238 414 IPR035686 -
Aed10g0637 439 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 237 423 - -
Aed10g0637 439 PRINTS Anthranilate synthase component II signature 280 289 - -
Aed10g0637 439 PRINTS Anthranilate synthase component II signature 392 405 - -
Aed10g0637 439 PRINTS Anthranilate synthase component II signature 307 318 - -
Aed10g0637 439 Pfam Carbamoyl-phosphate synthase small chain, CPSase domain 54 178 IPR002474 -
Aed10g0637 439 Hamap Carbamoyl-phosphate synthase small chain [carA]. 50 421 IPR006274 GO:0004088|GO:0006207|GO:0006541
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0637 Aed-Chr10 5122866 5126121 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0637 K01956 - gmx:100806168 852.818