Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0626 ATGGTGATGGAAGCCAAGCCCAGTAGAATTTGGGCCCCAATTTTTGCTACAGACTCTGCAGGCTTTTGCTGCACACCAGCCATTGATTCTTTTCCCCACCTTCCACCTATTTTTGGCACAAGCGGGGTGACCATCCAGCAAGTGTTCGGTGGAGCCACATCTCCCACAACCTCGCAAAGTAGGGTCTATGGTGGTACTCTCACTCATTACCAATCAACTCCTCTGGAACAAAACATATACAACAGGTGGATCCGGTTCAACGTGATCCATGATGTTGGTGCCAACAACGTTAAGATTTTTATTAATGGAGAGGATAATCCCAGATATCAATTTCCTAATACTAGTAAACTGGTCCAGCCTGTGGTTGGTTACAGGCCTGCAACAATGGTGCCGCAATCCATTTTGCCATTAATCATCTGTCTGGTCACTCTTTCCTTGGTTGCCGCAGATCCCACAGATGGGTTCACTCGTCTTTCACTGAGCAACTCAAACTTCCAAGTCCAAAGGCCTTACGACGTCCCAGTCAACCAACGCTACAGCTTTTCAAACGGAGTGCACAGGTTTTTGTTATACTCCACGGACAAGCCCCACTTTGAAGGCAGTGATACCAAGCCACGAACCGAGATTCGTATCACCGGTTACGATTATACATCTGGTGTGTGGCAATTTGAAGGAAATTTTTACGTGCCTAGTGGCACAAGTGGGACGTGCATCCAGCAAGTGTTCGGTGGAGCCTCATCTGCCACAACCTCGCAGAGTAGGGTCTATGGTGGTACTCTCACTCATTACCAATCGACTAATCTGGAACAAAACATATACAACAGGTGGATCCGGTTCAACGTGATCCATGATGTTGGTGCCAACAATGTTAAGATTTATATTAATGGGGGGATAAGGTACAATGGACCTGGTCGTGGAGCCGGAACTCACTACTTCAAGTTTGGGGTTTACGCACAGGATGGTGCTTCCAGCTACATGGAATCTCGTTGGAGGGATATCAAGCTTTTTAGAAAATACTAA 1020 0.4676 MVMEAKPSRIWAPIFATDSAGFCCTPAIDSFPHLPPIFGTSGVTIQQVFGGATSPTTSQSRVYGGTLTHYQSTPLEQNIYNRWIRFNVIHDVGANNVKIFINGEDNPRYQFPNTSKLVQPVVGYRPATMVPQSILPLIICLVTLSLVAADPTDGFTRLSLSNSNFQVQRPYDVPVNQRYSFSNGVHRFLLYSTDKPHFEGSDTKPRTEIRITGYDYTSGVWQFEGNFYVPSGTSGTCIQQVFGGASSATTSQSRVYGGTLTHYQSTNLEQNIYNRWIRFNVIHDVGANNVKIYINGGIRYNGPGRGAGTHYFKFGVYAQDGASSYMESRWRDIKLFRKY 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0626 339 SUPERFAMILY Concanavalin A-like lectins/glucanases 163 325 IPR013320 -
Aed10g0626 339 PANTHER ALGINATE LYASE 137 338 - -
Aed10g0626 339 PANTHER ALGINATE LYASE 39 104 - -
Aed10g0626 339 PANTHER BINDING PROTEIN, PUTATIVE, EXPRESSED-RELATED 137 338 - -
Aed10g0626 339 PANTHER BINDING PROTEIN, PUTATIVE, EXPRESSED-RELATED 39 104 - -
Aed10g0626 339 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 104 IPR013320 -
Aed10g0626 339 Pfam Alginate lyase 163 335 IPR014895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0626 Aed-Chr10 5049395 5056570 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0626 - - gmx:100791107 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0626 10 5049395 5056570 Aed10g0626 10 5049395 5056570 ECH