Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0610 ATGGCTTCAACTTCAATCACTACCTTCTCCATCTACTCCCAATCAAAGTTCCTCAATCTGATTCAAACCCACAACAAACGCACTTCAATTTCGTTTCAGCCCGCGATACTTCGCGCCACCCTTTTCTCAACACTCACTTGTTCCCACACCCCTTCCACACCCTCCTCAAATTTCCCACTGGGAACGACTTTTTCCAAGTTCCTCTCCGAAAAGGTAGCATTTTTCCTCATTGGGTCGTTTCTCTTATCGGGTTGCTTCAGCAAAAGACCCGCTTTCGCAGAACCAGCTCCTTCCGTGGGTTCTGGGGCAGTGCTGGAGGAGAAGACGAACCCCACCCAAGAGAGAAGTGAGGAAGAAGTGGAGGAAATGTGGGAGGAAATTTTGGAGAAGGATCCGAAAAATGTTGAGGCTTTGAAGGTGGTTTTGTATGCGAAGATTAGGAGAGGGAAGTCGAAGGAGGCTGTGAAGTTTGTGGAGGATTTGATTGCTGCGGAGCCGAATGAGGTTGAGTGGAGGCTTTTGCTTGCACTTTGTTATGAGACTATGGGGAACTTGAGTAAGGCTAAAAGATTGTTCAGGGAAATCTTGAAGAAGAGGCCTCTTCTAGTCAGAGCTTTGCATGGTTTGGCTATGGCAATGCACAAAAACCATGAAGGTCCTGCAGTATTTGAAATGCTAAATAATGCCCAAGAGATAGCTTCTCGTGAAAACAAAGTTACAGAGGAGAGAAATATAAGAATCTTAATTGCACAAATGCATGTTGTACAGGGTAATTTGGAGGAGGGCTTAAAAAGATTTCAAGAATTGATTGATCAAAATCCTCGAGATTTTAGGCCTTATATTTGCCAGGGAATAATATACAGTCTCCTGGGTAAAAATGAGGAAGCTGCACAGCAGTTTGAAACATATCAAAGTCTTGTGCCTGAAGAATTTCCTCAGAGAGGATTTATTGATGATGTTGCCATAGCAGCAAAAAGAACATCCCTGGAACAATTTAAGAAGGAATTTAGAGATCAATTTTCTTATCCGAAACAGAGATAG 1041 0.4323 MASTSITTFSIYSQSKFLNLIQTHNKRTSISFQPAILRATLFSTLTCSHTPSTPSSNFPLGTTFSKFLSEKVAFFLIGSFLLSGCFSKRPAFAEPAPSVGSGAVLEEKTNPTQERSEEEVEEMWEEILEKDPKNVEALKVVLYAKIRRGKSKEAVKFVEDLIAAEPNEVEWRLLLALCYETMGNLSKAKRLFREILKKRPLLVRALHGLAMAMHKNHEGPAVFEMLNNAQEIASRENKVTEERNIRILIAQMHVVQGNLEEGLKRFQELIDQNPRDFRPYICQGIIYSLLGKNEEAAQQFETYQSLVPEEFPQRGFIDDVAIAAKRTSLEQFKKEFRDQFSYPKQR 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0610 346 PANTHER OS05G0182100 PROTEIN 16 335 - -
Aed10g0610 346 SUPERFAMILY TPR-like 118 309 IPR011990 GO:0005515
Aed10g0610 346 SMART tpr_5 243 276 IPR019734 GO:0005515
Aed10g0610 346 SMART tpr_5 277 310 IPR019734 GO:0005515
Aed10g0610 346 SMART tpr_5 169 202 IPR019734 GO:0005515
Aed10g0610 346 Gene3D Tetratricopeptide repeat domain 106 322 IPR011990 GO:0005515
Aed10g0610 346 ProSiteProfiles TPR repeat profile. 243 276 IPR019734 GO:0005515
Aed10g0610 346 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 16 335 - -
Aed10g0610 346 Pfam Tetratricopeptide repeat 147 206 - -
Aed10g0610 346 Pfam Tetratricopeptide repeat 251 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0610 Aed-Chr10 4873937 4877527 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0610 - - gmx:100795327 593.964