Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0605 ATGCCGAAACAGTATCATCATTTCATTAGTCTGTGCCATATCTCTCAAACACTCTCTCTCTCTCTCTCTCGATCGGAAATCACTCTGATGGAGCAAAGTAAGGAGAAGAATGCTCCTTGGCTATCAGTGCCACAGTTTGGGGACTGGGATCAGAAGGGACAAGTGCCAGACTACTCGCTGGATTTTTCTAAAATTCGGGAAATGAGGAAGCAAAACAAGACAAATATTTCAAGGGCAAGTCTTGGTAATGAAGAGGAACTCATGGCTTCTGCCACTAACAATACAAATACTGTCCACAGTGATGAGCACCAGCACCCCCACTACCACCAAACCAACTCTCCAACTACAAGGAGGAGCTTCCTGAGCTACTTCAACTGCTGCGTAAAAGCTTGA 393 0.4529 MPKQYHHFISLCHISQTLSLSLSRSEITLMEQSKEKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKTNISRASLGNEEELMASATNNTNTVHSDEHQHPHYHQTNSPTTRRSFLSYFNCCVKA 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0605 130 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 30 129 - -
Aed10g0605 130 PANTHER PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEIN 30 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0605 Aed-Chr10 4840993 4845416 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0605 - - gmx:100796591 208.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0605 10 4840993 4845416 Aed10g0605 10 4840993 4845416 ECH