Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0601 ATGTCTTCAGAATCGGAGAGCTCAAACAGCCTAATCCCGTCCCTCCCAGACGACATCGCTTTGAACTGCATAGCACGCATCCCACGCTCCGACCACCCAACCCTATCCCTCGTTTCCAAACCAATTCGCACGCTCCTCTCTTCCCCGCTCTTGTTCACCACGCGCTTCCTCCTCCAATGCACCCAGCCACTCCTCTACCTCACTCTCCGCCCATACGACTCCCCCCTCCAATGGTTCACGCTCCACCGCACAAACCCTAATCCCGTTCTTGCCCCGCTTCCCCCGATCCCCTCCCCCGCCGTGGGCTCCGCCTACGCCGTCCTCGGCTCCACCATCTACGTCCTCGGCGGCTCCATCAACGACGTCCCCTCCCCCCACGTCTGGCTCCTCGACTGCCGCTTCAACCGCTGGCTCCCCGGCCCCTCCATGCGCGTCGCCCGCGAATTCGCCGCCGCCGGAGTCCTCCATGGCAAGATCTACGTCCTCGGCGGCTGCGTCGCCGACACCTGGTCCCGCTCCGCCAACTGGGCCGAGGTCCTCGACCCCGCCGCCGGCCGCTGGGAGAGGGTCCCCAGCCCCACCGAGGTCCGGGAGAAGTGGATGCACGCCAGCGCCGTCATCGGCGACCGCGTCTACGCCATGGCGGACCGTGGCGGCATCGCGTACGAGCCGCGCAGCGGCGCGTGGGAGAGCGTGGAAGGAGAATTGGACCACGGGTGGCGGGGGAGGGCGTGCGTGGTGGAGAAGATCTTGTACTGCTACGACTTTTTAGGGAAAATCAAAGGGTTCGATGTGGGGCGCGGGGTTTGGCAGGAGTTGAAGGGGTTGGAGAAGGGGTTGCCGAGGTTCCTGTGTGGGGCCACCATGGCTGATTTGGGTGGCAAATTGTGCGTGGTTTGGGAGTGCCAAGGGAATGGAAAGGAAATTGAGATTTGGTGCGCTGAGATTGGTGTAAAGAAGAATCCTGATGGGGAATTGTGGGGTCAACTTGGTTGGTTCGGGAAGGTTCTTTCTGTTCCCAAAGGCTCCTCCATTGTCAACTGTTCTTCTGTTTCCTTGTGA 1062 0.6215 MSSESESSNSLIPSLPDDIALNCIARIPRSDHPTLSLVSKPIRTLLSSPLLFTTRFLLQCTQPLLYLTLRPYDSPLQWFTLHRTNPNPVLAPLPPIPSPAVGSAYAVLGSTIYVLGGSINDVPSPHVWLLDCRFNRWLPGPSMRVAREFAAAGVLHGKIYVLGGCVADTWSRSANWAEVLDPAAGRWERVPSPTEVREKWMHASAVIGDRVYAMADRGGIAYEPRSGAWESVEGELDHGWRGRACVVEKILYCYDFLGKIKGFDVGRGVWQELKGLEKGLPRFLCGATMADLGGKLCVVWECQGNGKEIEIWCAEIGVKKNPDGELWGQLGWFGKVLSVPKGSSIVNCSSVSL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0601 353 SUPERFAMILY F-box domain 6 95 IPR036047 GO:0005515
Aed10g0601 353 Pfam Kelch motif 100 144 IPR006652 GO:0005515
Aed10g0601 353 Pfam Kelch motif 147 193 IPR006652 GO:0005515
Aed10g0601 353 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP6 2 336 - -
Aed10g0601 353 SUPERFAMILY Kelch motif 73 333 IPR015915 GO:0005515
Aed10g0601 353 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 2 336 - -
Aed10g0601 353 SMART kelc_smart 158 210 IPR006652 GO:0005515
Aed10g0601 353 SMART kelc_smart 111 157 IPR006652 GO:0005515
Aed10g0601 353 Gene3D - 64 329 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0601 Aed-Chr10 4826517 4827578 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0601 15 337 Miscellaneous Gene Families AT4G33900 38.177 4.61e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0601 - - gmx:100798508 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0601 10 4826517 4827578 Aed10g0601 10 4826517 4827578 ECH