Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0600 ATGGCTATCGCATTGAACATCTCAGTGTGTTGTTTCCCACAGCAGCAGCGTTGCCACCCCACTCTCTTCAAACCCACCAAACAAACCCTTTCCTTCCCCACCGCTTCCGCTTTCTCTTCCGCTTCCTTAACTCAACTCAGCGTGGGCGAAGATTTACCCGCCAATTACGACGATTGGATTCCCAAGCCCAGCCCCGAGCTTCGCAGAAGATGCGGCATTCTGCTCCATCCGACGTCGTTTCGCGGCCCCTACGGCATCGGCGATCTCGGCGAAGAGGCGTTTCGTTTCATCGACTGGCTCCATCATTCCGGTTGCTCCATTTGGCAGGTTCTTCCTCTCGTCCCACCTGGCAGGAAGGCCAACGAAGAAGGATCCCCTTACTCTGGCCAGGATGCGAATTGTGGCAACACGCTCTTGATCTCTCTTCAAGGCCTCGTCGAGGATGGATTGTTGGAAGAACACGAACTTCCTAAACCAATTGATGCAGAGCGCGTCAATTTTTCACTCGTTGCTGATCTTAAGGATCCTTTGATAACTAAGGCTGCAGAGAGGCTCATTGCAAGTGAAGGGGAACTCAAAACACAGCTTGAGAATTTTCGAAGTGACCCTGACATATCAAGCTGGCTTGAAGATGCAGCCTATTTTGCTGCTATCGATGACAGTTTAAACACAATCAGCTGGTACAATTGGCCTGAACCTTTAAGAAATCGCCATCTTGTAGCTCTAGAGGATATTTACCAGCAGAAGCAAGATTTTATAAGTATATTTATTGCGCAACAGTTCTTGTTTCAAAGGCAGTGGCAGAAAGTTCACAGCTATGCACAGAGTAAGGGAATCAGCATAATGGGAGACATGCCAATATATGTTGGTTATCATAGCGCAGATGTTTGGGCAAATAAGAAACAGTTTGTACTGAACAGGAAGGGCTTTCCTCTTTTGGTTAGTGGTGTTCCTCCTGATGCATTCAGTGAAACCGGTCAGCTTTGGGGCAGCCCCCTGTATGATTGGAAAGCCATGGAGAAAGATGGGTACTCATGGTGGATACGTCGCATACGACGTGCACAAAATTTATTTGATGAATTTAGGATTGACCACTTTAGAGGATTTGCTGGATATTGGGCTGTTCCTTCTGAAGCAAAAGTAGCTATGCTTGGAAAGTGGAAGGTAGGACCTGGAATATCCTTATTTGATGCCATTTTCAGAGCTGTTGGAAGGATTAATATTATAGCAGAAGACTTGGGAGTTATCACTGAGGATGTAGTCCAACTAAGAAGATCCATTGGAGCACCTGGAATGGCTGTTCTCCAGTTTGGGTTTGGAGGTGATGCTAATAACCCTCATTTGCCTCATAATCACGAGTCCAATCAAGTTGTCTATACAGGGACTCATGACAATGACACAATTGGAGGTTGGTGGGAAGCTTTGAACCAAGGAGAGAAATCCAATGTACTAAATTATCTTTCATTAAATGAGGGAGATGACATTCCATGGGTGCTAATCCAGAGAGCATTGGCTTCTGTTGCTCAAACAGCGATAATACCAATGCAAGATGTTCTTGGATTGGGTAATTCTGCCAGGATGAATATTCCAGCAACTCAGTTTGGAAACTGGGGTTGGAGAATTTCAAGTTCGGTGAGCTTTGATGGCTTGGAGAGAGAGGCAGACAAACTCAGAGCAATGCTTTCAATGTATGGTCGACTTTGA 1704 0.4595 MAIALNISVCCFPQQQRCHPTLFKPTKQTLSFPTASAFSSASLTQLSVGEDLPANYDDWIPKPSPELRRRCGILLHPTSFRGPYGIGDLGEEAFRFIDWLHHSGCSIWQVLPLVPPGRKANEEGSPYSGQDANCGNTLLISLQGLVEDGLLEEHELPKPIDAERVNFSLVADLKDPLITKAAERLIASEGELKTQLENFRSDPDISSWLEDAAYFAAIDDSLNTISWYNWPEPLRNRHLVALEDIYQQKQDFISIFIAQQFLFQRQWQKVHSYAQSKGISIMGDMPIYVGYHSADVWANKKQFVLNRKGFPLLVSGVPPDAFSETGQLWGSPLYDWKAMEKDGYSWWIRRIRRAQNLFDEFRIDHFRGFAGYWAVPSEAKVAMLGKWKVGPGISLFDAIFRAVGRINIIAEDLGVITEDVVQLRRSIGAPGMAVLQFGFGGDANNPHLPHNHESNQVVYTGTHDNDTIGGWWEALNQGEKSNVLNYLSLNEGDDIPWVLIQRALASVAQTAIIPMQDVLGLGNSARMNIPATQFGNWGWRISSSVSFDGLEREADKLRAMLSMYGRL 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0600 567 SUPERFAMILY (Trans)glycosidases 49 566 IPR017853 -
Aed10g0600 567 Pfam 4-alpha-glucanotransferase 75 542 IPR003385 GO:0004134|GO:0005975
Aed10g0600 567 Gene3D Glycosidases 66 567 - -
Aed10g0600 567 PANTHER 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC 29 567 IPR003385 GO:0004134|GO:0005975
Aed10g0600 567 TIGRFAM malQ: 4-alpha-glucanotransferase 67 554 IPR003385 GO:0004134|GO:0005975
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0600 26 567 Glycoside Hydrolase AT5G64860 72.376 0.0 831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0600 K00705 - gmx:100795007 1083.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0600 10 4820642 4825232 Aed10g0600 10 4820642 4825232 ECH