Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0581 ATGGCCGCGCGAGCCCTATTGAGCAGAAAAACCCTAGCCACTGTGCTCCGCAACGACCCCAAGCCCATCATCGGAGTTGGCATACCGGCGGCTACTCAATCCCGCAGTGTGCACGTGTACACGCTACCCGATCTGGACTACGACTATGGCGCGCTGGAGCCAGCCATCAGCGGCGAAATCATGCAACTCCACCATCAGAAGCACCACCAGACTTACATCACCAACTACAACAAGGCCCTGGAGCAGCTCCATGACGCCATCGCCAAGAAAGATTCCCCTGCCATCGTTAAGCTCCATGCCGCGATCAAGTTTAACGGCGGAGGTCATGTCAACCATTCTATTTTCTGGAAAAATCTAGCTCCTATTCGTGAGGGAGGTGGTGAACCACCTAAGGGTTCATTAGGATGGGCTATTGACACACATTTTGGCTCTTTTGAAGCATTAATACAAAAAGTTAACATAGAAGGTGCAGCCCTACAGGGGTCTGGATGGGTGTGGCTTGGTCTGGACAAAGAGTTGAAGAGGCTTGTTGTTGAAACCACTGCCAACCAGCCACTACACTCACTTTATTGGTCTAGACCCAACCACCAAAACACCAAGAGATCTCAGGACCCACTAGTTACTAAGGGACCAAGCTTGGTTCCATTGCTTGGCATTGATGTTTGGGAGCATGCTTACTACTTGCAGTACAAAAATGTTAGACCAGACTATCTGAAGAGCATTTGGAAAGTTATTAATTGGAAATATGCTAGTGAAGTGTTTGAGAAAGAGAGCTCTTAG 780 0.4897 MAARALLSRKTLATVLRNDPKPIIGVGIPAATQSRSVHVYTLPDLDYDYGALEPAISGEIMQLHHQKHHQTYITNYNKALEQLHDAIAKKDSPAIVKLHAAIKFNGGGHVNHSIFWKNLAPIREGGGEPPKGSLGWAIDTHFGSFEALIQKVNIEGAALQGSGWVWLGLDKELKRLVVETTANQPLHSLYWSRPNHQNTKRSQDPLVTKGPSLVPLLGIDVWEHAYYLQYKNVRPDYLKSIWKVINWKYASEVFEKESS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0581 259 SUPERFAMILY Fe,Mn superoxide dismutase (SOD), C-terminal domain 125 256 IPR036314 -
Aed10g0581 259 Gene3D Fe,Mn superoxide dismutase (SOD) domain 57 120 IPR036324 -
Aed10g0581 259 PANTHER SUPEROXIDE DISMUTASE 24 185 - -
Aed10g0581 259 PANTHER SUPEROXIDE DISMUTASE 199 258 - -
Aed10g0581 259 SUPERFAMILY Fe,Mn superoxide dismutase (SOD), N-terminal domain 34 121 IPR036324 -
Aed10g0581 259 Pfam Iron/manganese superoxide dismutases, alpha-hairpin domain 40 120 IPR019831 GO:0004784|GO:0006801|GO:0046872
Aed10g0581 259 Pfam Iron/manganese superoxide dismutases, C-terminal domain 130 251 IPR019832 GO:0004784|GO:0006801|GO:0046872
Aed10g0581 259 ProSitePatterns Manganese and iron superoxide dismutases signature. 220 227 IPR019833 GO:0004784|GO:0006801|GO:0046872
Aed10g0581 259 Gene3D - 121 259 IPR036314 -
Aed10g0581 259 PANTHER SUPEROXIDE DISMUTASE 2 24 185 - -
Aed10g0581 259 PANTHER SUPEROXIDE DISMUTASE 2 199 258 - -
Aed10g0581 259 PRINTS Manganese superoxide dismutase signature 43 54 IPR001189 GO:0004784|GO:0006801|GO:0046872
Aed10g0581 259 PRINTS Manganese superoxide dismutase signature 218 230 IPR001189 GO:0004784|GO:0006801|GO:0046872
Aed10g0581 259 PRINTS Manganese superoxide dismutase signature 64 77 IPR001189 GO:0004784|GO:0006801|GO:0046872
Aed10g0581 259 PRINTS Manganese superoxide dismutase signature 103 116 IPR001189 GO:0004784|GO:0006801|GO:0046872
Aed10g0581 259 PIRSF MnSOD_FeSOD 24 195 IPR001189 GO:0004784|GO:0006801|GO:0046872
Aed10g0581 259 PIRSF MnSOD_FeSOD 187 259 IPR001189 GO:0004784|GO:0006801|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0581 Aed-Chr10 4663345 4666656 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0581 K04564 - gmx:100101896 450.284