Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0579 ATGGCGAAGCAGAAACAACTTCACAACACTCTTTTGGTGTACTTGGTGATTCTCTTCTTATGTGTTTCATCGGTTTCGGTTTCAGCGAGAGTTGCGCCTCTCTTGCAGAGTTATGTGAACCCAATTTTCAGATCAAATTTTCATTCTATTTACGACACTTCCAAGTACGGTGTGTTTCAACTGAGTAATGGGTTGGCTAAAACGCCTCAGATGGGATGGAATAGCTGGAACTTCTTTGCATGCAATATCAATGAAACGGTTATTAAGGAAACGGCTGATGCACTGGTATCAACAGGGTTGGCTGATTTAGGTTATGTTTTTGTTAACATAGATGATTGCTGGTCTACTGTGACAAGAAATCTGAAGGGTCAACTGGTTCCTGATCATAAGACATTTCCATCTGGAATCAAAGCTCTAGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGCATATACTCTGATGCTGGATATCCGCCTATGCGTGATGCTCTCAATGCGACCGGGCGTAAGATTTTCTATTCACTCTGTGAATGGGGTGTTGATGACCCTGCCTTGTGGGCAGACAAGGTTGGTAACAGTTGGCGCACAACCGGAGATATCAATGATTCATGGGCAAGCATGACAACCATTGCCGATCTTAATGATAAGTGGGCTGCATATGCTGGTCCTGGTGGATGGAATGACCCAGATATGTTGGAAGTTGGTAATGGTGGCATGACTTACCAGGAATACCGTGCTCACTTCAGCATCTGGGCTTTAGCAAAGGGAAGGCAAGTTCTAGTTTCTGGAATAGATGGTTGCAGACAGGTTTGGGCAGGTCCTTTGTCAGGAAACCGATTGGTTGTTGCTCTATGGAATCGGTGCTCAAAAGTTTCTACTATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGGGGTTCATGTTTCTGTCAGGGATTTGTGGCAGCACAAGGTAGTAAATGGAGATGCAGTGACATCATTCAGTGCTCGAGTTGATATCCACGACTCTCAACTGTACATTTTCACTCCATTTACAGTATCTCATTCTGTAGAGTAA 1062 0.4407 MAKQKQLHNTLLVYLVILFLCVSSVSVSARVAPLLQSYVNPIFRSNFHSIYDTSKYGVFQLSNGLAKTPQMGWNSWNFFACNINETVIKETADALVSTGLADLGYVFVNIDDCWSTVTRNLKGQLVPDHKTFPSGIKALADYVHGKGLKLGIYSDAGYPPMRDALNATGRKIFYSLCEWGVDDPALWADKVGNSWRTTGDINDSWASMTTIADLNDKWAAYAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWALAKGRQVLVSGIDGCRQVWAGPLSGNRLVVALWNRCSKVSTITASWEALGLESGVHVSVRDLWQHKVVNGDAVTSFSARVDIHDSQLYIFTPFTVSHSVE 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0579 353 CDD GH27 69 256 IPR002241 GO:0004553|GO:0005975
Aed10g0579 353 SUPERFAMILY Glycosyl hydrolase domain 266 344 - -
Aed10g0579 353 Pfam Alpha galactosidase C-terminal beta sandwich domain 267 342 IPR041233 -
Aed10g0579 353 Gene3D - 264 348 IPR013780 -
Aed10g0579 353 Pfam Alpha galactosidase A 68 157 IPR002241 GO:0004553|GO:0005975
Aed10g0579 353 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 158 258 IPR002241 GO:0004553|GO:0005975
Aed10g0579 353 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 45 157 IPR002241 GO:0004553|GO:0005975
Aed10g0579 353 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 256 344 IPR002241 GO:0004553|GO:0005975
Aed10g0579 353 PANTHER ALPHA-GALACTOSIDASE 3 45 157 - -
Aed10g0579 353 PANTHER ALPHA-GALACTOSIDASE 3 158 258 - -
Aed10g0579 353 Gene3D Aldolase class I 159 263 IPR013785 -
Aed10g0579 353 PANTHER ALPHA-GALACTOSIDASE 3 256 344 - -
Aed10g0579 353 PRINTS Glycosyl hydrolase family 27 signature 63 82 IPR002241 GO:0004553|GO:0005975
Aed10g0579 353 PRINTS Glycosyl hydrolase family 27 signature 99 114 IPR002241 GO:0004553|GO:0005975
Aed10g0579 353 PRINTS Glycosyl hydrolase family 27 signature 140 161 IPR002241 GO:0004553|GO:0005975
Aed10g0579 353 ProSitePatterns Alpha-galactosidase signature. 104 120 IPR000111 GO:0004553|GO:0005975
Aed10g0579 353 SUPERFAMILY (Trans)glycosidases 61 257 IPR017853 -
Aed10g0579 353 Gene3D Aldolase class I 61 158 IPR013785 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0579 1 351 Glycoside Hydrolase AT3G56310 55.172 6.16e-157 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0579 K07407 - gmx:100784072 627.091