Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0417 ATGGCGGATTCAGAGCGAATCCAAAATCCCTGGATGGCTTCGGACCACCCTGCAATTCAAATGAACGGCGATGGCACAGATTCGAGGCAATGTTCTTCTCCGCCGCCGCTAAAATCATCCCATTTTGATAAATTGGGAATCGTAGAACGAACTTTCTCCGCCGCTGGCGCCGCCTTCCTCTCCGCCATTATCGTCAATCCCCTCGATGTTGTCAAGACAAGGTTGCAAGCACAAGCGGCTGGGGTTGCATATTCTCATCCTCTCAGTAATATGACCAGTAGAATGGGTTGTTTTGGGCCAAATATGATATTTGCTGATTTAAGATGTTCTCCATCATGCCACCGAGCTGGAATCCAGGGCACAGTGTCCATTTGTCCCCCTGAGTGTTTTCGCTACAAAGGAACACTAGATGTCATGTACAAAATTATAAAACAGGAGGGATTTTCTAGGCTATGGAGAGGAACAAATGCTGGTTTGGCTCTTGCAGTACCAACTGTTGGAATTTACCTTCCTTGCTATGACATATTCCGCAATTGGTTGGAGGAATTCACAGCTGAAAATGCACCAACCACAACTACTTATGTACCTCTAGTAGCTGGTTCATTGGCACGCTCTCTAGCTTGCGCAGCTTGCTACCCTATTGAACTTGCTAGAACTCGTATGCAGGCATTTAAAGAGACTCAAATTGGTAAAAAGCCTCCTGGAGTGATCCAGACTTTGCTAGGTGTTGTCTCACATGTCAAGAGCACAAACAGTTCACAGAACAGCTTGCATGGTTATCGTGTTTTGTGGACTGGCATGGGAGCTCAACTTGCCCGCGATGTACCCTTCTCTGCTATTTGTTGGTCAACACTTGAACCAACTAGAAGAAAACTTCTTGGTTTGATTGGAGGTGATGATGCCAATGCATTGAGTGTTTTGGGGGCAAATTTTGGGGCTGGAGATGGAGGCTTGAAAGGATTGTTTACGGGTGTTGGTCCACGAGTTGCTCGAGCAGGCCCCTCCGTTGGAATTGTGATTTCATTTTATGAAGTTGTAAAGTTTGTTCTACATCATCGGTACCCAGCATCATCATGA 1077 0.4615 MADSERIQNPWMASDHPAIQMNGDGTDSRQCSSPPPLKSSHFDKLGIVERTFSAAGAAFLSAIIVNPLDVVKTRLQAQAAGVAYSHPLSNMTSRMGCFGPNMIFADLRCSPSCHRAGIQGTVSICPPECFRYKGTLDVMYKIIKQEGFSRLWRGTNAGLALAVPTVGIYLPCYDIFRNWLEEFTAENAPTTTTYVPLVAGSLARSLACAACYPIELARTRMQAFKETQIGKKPPGVIQTLLGVVSHVKSTNSSQNSLHGYRVLWTGMGAQLARDVPFSAICWSTLEPTRRKLLGLIGGDDANALSVLGANFGAGDGGLKGLFTGVGPRVARAGPSVGIVISFYEVVKFVLHHRYPASS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0417 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 191 291 IPR018108 -
Aed10g0417 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 45 179 IPR018108 -
Aed10g0417 358 MobiDBLite consensus disorder prediction 1 37 - -
Aed10g0417 358 PANTHER BNACNNG35730D PROTEIN 37 314 - -
Aed10g0417 358 MobiDBLite consensus disorder prediction 21 37 - -
Aed10g0417 358 Gene3D Mitochondrial carrier domain 24 104 IPR023395 -
Aed10g0417 358 Gene3D Mitochondrial carrier domain 115 357 IPR023395 -
Aed10g0417 358 Pfam Mitochondrial carrier protein 192 292 IPR018108 -
Aed10g0417 358 Pfam Mitochondrial carrier protein 45 181 IPR018108 -
Aed10g0417 358 PANTHER BNACNNG35730D PROTEIN 315 357 - -
Aed10g0417 358 PANTHER FI19922P1-RELATED 37 314 IPR045315 GO:1990542
Aed10g0417 358 PANTHER FI19922P1-RELATED 315 357 IPR045315 GO:1990542
Aed10g0417 358 SUPERFAMILY Mitochondrial carrier 45 345 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0417 Aed-Chr10 3380613 3385282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0417 48 222 Organic Solute Cotransporters AT4G32400 24.775 1.90e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0417 K15119 - gmx:100810960 630.172