Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0412 ATGATGGGGTTCATGTTAGTGTGTTTGTGTTGTGTTTTTGATGAGATTCTTACTCTATTTTCTGGTTTGATCTTTTCGTTGGTTCGAGAAAAAGATGTCTGTTGGGAATATGCAGAGAAATTAGATGGAAACAAGGTAAGGTGTAAATTTTGCCAAAGAGTTCTGAATGGTGGCATAAGTAGGTTGAAGCATCATTTATCTCGATTCCCAAGTAAAGGGGTAAATCCTTGTAGCAAGGTCAGAGATGATGTTACAGATAGAGTAAGGGGTATAATGGCATCAAAGGAAGAGGTCAAAGAAACCTCCAGTGTGAAGAAGCAAAAAATAGCAGAGCTCAAGTCTACCAGTAATCTTTCAGCAACTAAAGCACTTGTATCTTTGGATGCAGCATCTCCTGTCATGAAGATTTTCCCTACTGGCAATCCTATGACCCCTTCCTCTACAAATAACCAAGAGAATGCAGAGAGAAGTATCGCTCTATTCTTTTTTGAGAATAAGCTAGACTTCAGTGTTGCACGGTCTTCATCCTATCAGTCGATGATTGATGCCATTGCAAATGCCTCATTGCTCGATCTTATGAAGAAGTACAGTGGAGGCCAGGAACTTATCAGGACTGGGATCACAAAGTCTGTATCCACCTTCCTGTCTTTACAGTCTATGTTGAAGTTGAGAACTAGATTGAAGAATATGTTCCACAGCCATGAATATGCCTCCAACACTTCCTATGCAAATAAACCACAGAGTCTTTCTTGTGTTGCAATTGCTGAAGATGATATGAGGCGTGACATCACCAATCAAATCTATACTTTTACAAAGGCACACGGCATGTTTGGCTGTAGCCTAGCAAAGGAGGCAAGGAGTACAGTTGCACCGTATCAGTCAAAAGAAGCAAACTTAAAAGGCGAAGTTGGCATCCGAATCCGAAGTGGGAAGGCACAAGCTCGTTTACGCAACGCGAGTGATTGTTACCCGTTGAATTTTTTCGATTCGATGGACTACGATTTCAGAAGCAGGTCGAGCTCACAAGCTCCGATGTACCGTCCGCCACCGCCACCGTCACCGATGTACCGTCCATCACCGTATCAGCAGAATCCTACTCCTTCTCGTAACTCTCTCTCAACAAATTCCAAACTGATTAGGGGATTAACAGGATTTGGCGTTAGGGTTGGTATAAAGCCAGAATACAGGATCACACCGCCGCCTCATTTATCATCACATGCGGGAGACAATCCACGGAGCAACTTCCAATTTGATTTTGGATTGGAGAGAAAATTTTTAGCTGAAGCAGGGAAGGATAATCCAAATTGGAGCAAATTTGGATCCGAAAATGTTCCGATTAAAGTTTCTGATGCATCAACAGCAAAGGTTACTGCTTTGGATCCCATTGTGAGCAAATTTGTAGCTATGGGGCTTAGCCAAGAGGCTGTTCCCATTGCGGTTGAAAATTATGGTGATGATCCAACCAAAGTTCAGGAATTTGTCAATGGCTACACACTTTTGCGTGAAATGGGATTTTCATCAAATAGCGTCGCTGAAGCCCTGGTTATGAATGACAATCATACGGACAAGGCACTAGCACATTTCCTTAATGGCTCATCGTGA 1602 0.4257 MMGFMLVCLCCVFDEILTLFSGLIFSLVREKDVCWEYAEKLDGNKVRCKFCQRVLNGGISRLKHHLSRFPSKGVNPCSKVRDDVTDRVRGIMASKEEVKETSSVKKQKIAELKSTSNLSATKALVSLDAASPVMKIFPTGNPMTPSSTNNQENAERSIALFFFENKLDFSVARSSSYQSMIDAIANASLLDLMKKYSGGQELIRTGITKSVSTFLSLQSMLKLRTRLKNMFHSHEYASNTSYANKPQSLSCVAIAEDDMRRDITNQIYTFTKAHGMFGCSLAKEARSTVAPYQSKEANLKGEVGIRIRSGKAQARLRNASDCYPLNFFDSMDYDFRSRSSSQAPMYRPPPPPSPMYRPSPYQQNPTPSRNSLSTNSKLIRGLTGFGVRVGIKPEYRITPPPHLSSHAGDNPRSNFQFDFGLERKFLAEAGKDNPNWSKFGSENVPIKVSDASTAKVTALDPIVSKFVAMGLSQEAVPIAVENYGDDPTKVQEFVNGYTLLREMGFSSNSVAEALVMNDNHTDKALAHFLNGSS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0412 533 PANTHER HAT TRANSPOSON SUPERFAMILY 258 295 - -
Aed10g0412 533 PANTHER HAT TRANSPOSON SUPERFAMILY 185 258 - -
Aed10g0412 533 PANTHER HAT TRANSPOSON SUPERFAMILY 28 185 - -
Aed10g0412 533 MobiDBLite consensus disorder prediction 344 361 - -
Aed10g0412 533 MobiDBLite consensus disorder prediction 339 375 - -
Aed10g0412 533 Pfam BED zinc finger 33 68 IPR003656 GO:0003677
Aed10g0412 533 Gene3D UBAP1 SOUBA domain 448 532 IPR042575 -
Aed10g0412 533 PANTHER OSJNBA0013A04.12 PROTEIN 258 295 - -
Aed10g0412 533 PANTHER OSJNBA0013A04.12 PROTEIN 185 258 - -
Aed10g0412 533 PANTHER OSJNBA0013A04.12 PROTEIN 28 185 - -
Aed10g0412 533 ProSiteProfiles Zinc finger BED-type profile. 29 84 IPR003656 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0412 Aed-Chr10 3327150 3333820 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0412 - - gmx:100500107 337.035