Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0411 ATGAAGAGCAGAGGATCGAGTCACAGACTCTCCAGTATGGGGAATAATCGATCCCGCACTCCCGCACTCCTCATCTCCATGTTCGCCACTTTCGCTGCTATCTACGTCGCTGGAAGGCTGTGGCAGGACGCAGAGAATCGCGTTTATCTCATCAAAGAGCTCGATAGGATCACTGGTCAGGGACAATCTGCTATATCTGTGGATGATACATTGAAGATCATAGCCTGCAGGGAACAACATAAGAGGCTTGATGCCCTTGAGACAGAACTTGCTGCAGCCACACAAGAGGGTTTTGTTTCAAAGCCCCTGCTAGAGACTAATGGAACTTACTCAACGAGAAGGCCGTTGGTCGTGATAGGTATACTGACAAAGTTTGGCCGCCAGAAGAATAGAGATGCAATCCGCAAGGCATGGATGGGAAGTGGTGCATCTTTGAAGAAAATTGAAGAAGAAAAGGGCATCATTGTGCGATTTGTTATTGGTAGAAGTGAAAATCGTGGAGACAATCAAGATAAAGACATTGATCGTGAGAATAGACTGACTAATGACTTCTTAATTCTCGATAATCATGTGGAAACAAATGAAGCATTCCCAAAGAAGGCCAAATTGTTCTTTGCTCATGCCGCAGACAAATGGGATGCTGAGTTTTATGCGAAAGTCAACGATGATGTCTATGTAAATATTGATGCCTTGGGAGCTACACTTGCTACTCATTTGGACAAACCTCGTGTTTACATGGGATGCATGAAATCAGGCGAAGTTTTCTCTGAGCTATACTTTCGCCATGCATCAGGAGAAATGTATGTTATATCCCGAGCTTTGGCTAAATTTATATCAATAAACAGGTCTATTCTTCGTACCTATGCTCACGATGATGTGAGTGCTGGATCCTGGTTTATTGGGCTTGATGTGAAGCATGAGCAATCTGTGCCGGTGTTTGAGTTGATTTCATTGCATTCTTGTGAGAAGTCCACAAACTTTATACACAGGAGTCATCAATTGTTAGAAGGTTTGCTTCCTAAGATTTTTCAATTTCTATTGGAAGCGAAGTGA 1053 0.4321 MKSRGSSHRLSSMGNNRSRTPALLISMFATFAAIYVAGRLWQDAENRVYLIKELDRITGQGQSAISVDDTLKIIACREQHKRLDALETELAAATQEGFVSKPLLETNGTYSTRRPLVVIGILTKFGRQKNRDAIRKAWMGSGASLKKIEEEKGIIVRFVIGRSENRGDNQDKDIDRENRLTNDFLILDNHVETNEAFPKKAKLFFAHAADKWDAEFYAKVNDDVYVNIDALGATLATHLDKPRVYMGCMKSGEVFSELYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFIGLDVKHEQSVPVFELISLHSCEKSTNFIHRSHQLLEGLLPKIFQFLLEAK 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0411 350 Pfam Domain of unknown function (DUF4094) 18 94 IPR025298 -
Aed10g0411 350 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 308 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aed10g0411 350 Coils Coil 76 96 - -
Aed10g0411 350 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE HPGT1 1 308 - -
Aed10g0411 350 Pfam Galactosyltransferase 130 308 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aed10g0411 350 Gene3D - 106 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0411 Aed-Chr10 3321831 3326538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0411 23 306 Glycosyltransferase AT5G53340 66.445 1.94e-146 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0411 K20854 - gmx:100779561 565.844