Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0407 ATGAAGAGGAGCAGAGATATGATGGAGAAGAGATCAGAGATAAACTCTGCTATTGAAGAGTTGACCATGCTGGTTATAGTCAAACCTGAAGGAAAACATCAGATTGCACACATCCCCACCAAGCCTTTCCTCTCTCTATGTTACTTTGTTCTACAAAGGTTGGAAGTGATGCATGAATTGAATCCATCAATGAATTCAAATTTGGTAGAAATATTGAAATCAGAAGCTAGCAAAGGCAACTCAAGGAAGAGGTCTAGTTGTAGTAAAGCCTTTCTTTGGCTCACTAGGTCCCTGGATTTCTCCTCAGCATTGTTACAATCACTAGAAAATGATCCTAAAAAGAATATGGAGCAAATAGTTCAAGAATCTTATGATGCAACCTTGTCACCATGGCATGGATGGATTTCGTCAGCCGCTTTCAGAGTGGCTAAAAAGCTAGTGCCAGATAGTAAAACTTTCATGGATCTCCTCAAGGAAAAAGATGAAAACTATGAAACCCTAAAGGAGAAAATGCAGATCTTGGTTTCCTTGCTTGTGCCTTTTCTTGAGGATGTACAATGA 561 0.3939 MKRSRDMMEKRSEINSAIEELTMLVIVKPEGKHQIAHIPTKPFLSLCYFVLQRLEVMHELNPSMNSNLVEILKSEASKGNSRKRSSCSKAFLWLTRSLDFSSALLQSLENDPKKNMEQIVQESYDATLSPWHGWISSAAFRVAKKLVPDSKTFMDLLKEKDENYETLKEKMQILVSLLVPFLEDVQ 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0407 186 Gene3D Glycolipid transfer protein 11 186 IPR036497 -
Aed10g0407 186 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 5 55 - -
Aed10g0407 186 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 52 185 - -
Aed10g0407 186 Coils Coil 157 177 - -
Aed10g0407 186 Pfam Glycolipid transfer protein (GLTP) 52 158 IPR014830 GO:0005737|GO:0120009|GO:0120013
Aed10g0407 186 SUPERFAMILY Glycolipid transfer protein, GLTP 37 184 IPR036497 -
Aed10g0407 186 PANTHER GLYCOLIPID TRANSFER PROTEIN (GLTP) FAMILY PROTEIN 5 55 - -
Aed10g0407 186 PANTHER GLYCOLIPID TRANSFER PROTEIN (GLTP) FAMILY PROTEIN 52 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0407 Aed-Chr10 3286335 3288204 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0407 - - gmx:100527808 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0407 10 3286335 3288204 Aed10g0407 10 3286335 3288204 ECH