Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0380 ATGGTTGGCAAGGATAATAATCTGAGGGCCGAGGACTTGAACTTGTGCTTTGAGAAGCTTATGATGGTGGCTGGGAGTGGGAACAGTGAGAAGGGGGTGAACTTGAAGGTTGGGGTGATCACCGAGTGGAAGGACATTCCTGTGGAGCTTTTGATGCAAATTCTGTCCCTTGTGGATGATCAAACGGTCATCACAGCTTCTGGAGTTTGTCGTGGATGGAGAGATGCTATTTACTTTGGCCTTGCTCGTTTATCACTCTCATGGTGTAGCAAGAACATGAATAACTTGGTCCTATCTCTTGTTCCTAAATTCTATAAACTGCAAACATTAATCCTCCGTCAAGACAAGCCTCAACTAGAGGACAATGCTGTTGAAACTATTGCAAAATGCTGTCATGAACTGCAGATCCTGGACCTCAGCAAAAGTTTCAAGCTAACTGATCGTTCACTCTATGAACTCGCACTTGGTTGTCGCGATCTTACAAAACTCAACATCAGCGGGTGTTCATCATTTAGTGACAATGCTCTGGCTTACCTTGCCAGTTTCTGCAGAAAACTGAAAGTCCTAAATCTCTGTGGATGTGTTAGAGCTGCATCTGATACTGCATTACAGGCTATTGGACAATACTGCAATCAGTTACAATCTTTGAACCTTGGATGGTGTGATAATGTTGGCGATGTTGGAGTGACTACTTTAGCATACGGGTGTCCTGATCTTAGGATAGTTGACTTGTGTGGCTGTGTCCGTATAACAGATGATAGTGTGATTGCATTGGCAAGCAGATGCCCCCATCTTCGGTCCCTAGGACTGTACTACTGCAAGAACATCACAGACAGAGCAATGTATTCATTGGCACACAGCAAGGTGAACAACAGGATGTGGGGATCAACTGCGAAAGGAGGAGGAAATGATGAAGATGGGTTAAAGACTTTGAACATTAGCCAATGCACTGCACTCACCCCATCTGCTGTTCAAGCTGTTTGTGACTCATTCCCTTCCCTTCACACTTGCTCAGGGAGGCATTCACTCATCATGAGTGGCTGCCTCAACTTGACATCAGTGCATTGTGCTTGTGCTTTCCATGCACACCGTGCTGCATTCACCACTTTCCCTCATCCTTCTGCTCATTAA 1131 0.4527 MVGKDNNLRAEDLNLCFEKLMMVAGSGNSEKGVNLKVGVITEWKDIPVELLMQILSLVDDQTVITASGVCRGWRDAIYFGLARLSLSWCSKNMNNLVLSLVPKFYKLQTLILRQDKPQLEDNAVETIAKCCHELQILDLSKSFKLTDRSLYELALGCRDLTKLNISGCSSFSDNALAYLASFCRKLKVLNLCGCVRAASDTALQAIGQYCNQLQSLNLGWCDNVGDVGVTTLAYGCPDLRIVDLCGCVRITDDSVIALASRCPHLRSLGLYYCKNITDRAMYSLAHSKVNNRMWGSTAKGGGNDEDGLKTLNISQCTALTPSAVQAVCDSFPSLHTCSGRHSLIMSGCLNLTSVHCACAFHAHRAAFTTFPHPSAH 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0380 376 SUPERFAMILY F-box domain 43 79 IPR036047 GO:0005515
Aed10g0380 376 PANTHER UNCHARACTERIZED 1 356 - -
Aed10g0380 376 Pfam F-box-like 44 77 IPR001810 GO:0005515
Aed10g0380 376 SUPERFAMILY RNI-like 80 286 - -
Aed10g0380 376 Pfam Leucine Rich repeat 210 233 IPR001611 GO:0005515
Aed10g0380 376 Pfam Leucine Rich repeat 262 285 IPR001611 GO:0005515
Aed10g0380 376 PANTHER F-BOX SKP2A-LIKE PROTEIN 1 356 - -
Aed10g0380 376 SMART LRR_CC_2 131 156 IPR006553 -
Aed10g0380 376 SMART LRR_CC_2 210 235 IPR006553 -
Aed10g0380 376 SMART LRR_CC_2 157 182 IPR006553 -
Aed10g0380 376 SMART LRR_CC_2 236 261 IPR006553 -
Aed10g0380 376 SMART LRR_CC_2 305 330 IPR006553 -
Aed10g0380 376 SMART LRR_CC_2 183 209 IPR006553 -
Aed10g0380 376 SMART LRR_CC_2 262 287 IPR006553 -
Aed10g0380 376 SMART LRR_CC_2 104 130 IPR006553 -
Aed10g0380 376 Gene3D Ribonuclease Inhibitor 81 294 IPR032675 -
Aed10g0380 376 Gene3D - 40 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0380 Aed-Chr10 3073541 3076923 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0380 K03875 - gmx:100797840 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0380 10 3073541 3076923 Aed10g0380 10 3073541 3076923 ECH