Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0379 ATGGCTAAAGTTTGTTGGCCATATTTTGATCCTGAGTATGAGAACTTCAGCAATAGAATGAACCCTCCAAGGGTCTCTGTGGACAATGCTAGTTGCCATGACTGTACACTGATTAAGATTGATAGTGTTAACAAACCTGGAATTCTGCTGGAAGTTGTGCAAATCTTGACAGACCTTGACTTCGTAATTACCAAAGCTTACATATCTTCTGATGGGGGTTGGTTTATGGATGTATTTCATGTCACGGATCAGCAAGGAAAAAAGATAACAGATGGCAAAACCATCGACCTTATTGAAAAGGCTCTAGGACCAAAGAGCCAGAGCACAGAAGGGGTGAAAAACTGGCCTAGCAAACGCGTTGGAGTGCATTCTGTTGGTGATCATACAACCATTGAGCTAATTGGCAGAGACCGCCCGGGACTATTGTCTGAGATTTCAGCTGTTCTTGCCAACCTCAATTTCAATGTTTTTGCAGCAGAAGTTTGGACTCACAACAGGCGAATCGCTTGCGTCCTTTATGTCAATGATGCTGCTACAAACCGAGCTGTGGATGATCCAAACAGATTATCTCTTATGGAGGAGCAGCTCAACAACATCTTACGTGGATGTGATGGTGAGAAAGTTGCTAGGACCAGTTTCTCCATGGGATCCACGCATATGGATCGGCGGCTTCACCAAATGCTGTTTGCTGATAGAGATTATGAAAGTTATGCAGTAGCAAGAGACGTTGATAGTCCTCCCTCTTTAAGGCCAAAGATCACAATAGAACGTTGTGAGGAAAAAGGGTACTCAGTGGTCAGTGTCAAGTGCAAAGATAGGGCCAAACTTATGTTTGACATTGTTTGCACTCTTACTGATATGCAATATGTTGTTTTCCATGCCACAGTCTCATCAGATGGCCCTTATGCATTGCAGGAGTATTTTATTCGACATATGGATGGATGCACGCTTGACACACAAGGAGAGAAAGAAAGGGTCATCCAATGCATTGAAGCTGGTATTCGAAGAAGAGTAAGCGAGGGTGTGAGCCTTGAGCTGTGTGCAAAGGATAGGGTGGGGTTGCTGTCAGAAGTAACAAGGATTCTGAGAGAGAATGGGTTGACAGTGTGTAGGGCAGGTGTAACAACAAGAGGGGAGCAAGCAGTGAATGTGTTCTACGTGAGGGATGCATCAGGGAACCCTGTGGACATGAAAACTGTCGAAGCACTTCGTAAAGAAATAGGTAAGACAATGATGGTGTTGGTGGATGTCAAGAGAGTTCCAAGCAAAACAACCAATATTGCCAAAGCACCTTCAGAGACTCGAGGATGGGCCAAAACTAGTTTCTTCTTTGGTAACTTGTTCGAAAGGTTCTTGACCTGA 1362 0.442 MAKVCWPYFDPEYENFSNRMNPPRVSVDNASCHDCTLIKIDSVNKPGILLEVVQILTDLDFVITKAYISSDGGWFMDVFHVTDQQGKKITDGKTIDLIEKALGPKSQSTEGVKNWPSKRVGVHSVGDHTTIELIGRDRPGLLSEISAVLANLNFNVFAAEVWTHNRRIACVLYVNDAATNRAVDDPNRLSLMEEQLNNILRGCDGEKVARTSFSMGSTHMDRRLHQMLFADRDYESYAVARDVDSPPSLRPKITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSDGPYALQEYFIRHMDGCTLDTQGEKERVIQCIEAGIRRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCRAGVTTRGEQAVNVFYVRDASGNPVDMKTVEALRKEIGKTMMVLVDVKRVPSKTTNIAKAPSETRGWAKTSFFFGNLFERFLT 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0379 453 CDD ACT_ACR_4 341 412 - -
Aed10g0379 453 ProSiteProfiles ACT domain profile. 130 210 IPR002912 -
Aed10g0379 453 SUPERFAMILY ACT-like 32 106 IPR045865 -
Aed10g0379 453 SUPERFAMILY ACT-like 125 202 IPR045865 -
Aed10g0379 453 SUPERFAMILY ACT-like 339 410 IPR045865 -
Aed10g0379 453 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 4 453 - -
Aed10g0379 453 Pfam ACT domain 129 200 IPR002912 -
Aed10g0379 453 Pfam ACT domain 37 85 IPR002912 -
Aed10g0379 453 CDD ACT_ACR_2 129 202 - -
Aed10g0379 453 ProSiteProfiles ACT domain profile. 343 422 IPR002912 -
Aed10g0379 453 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 453 IPR040217 -
Aed10g0379 453 Gene3D - 338 423 - -
Aed10g0379 453 Gene3D - 128 208 - -
Aed10g0379 453 CDD ACT_ACR_3 263 337 - -
Aed10g0379 453 CDD ACT_ACR_1 35 105 - -
Aed10g0379 453 ProSiteProfiles ACT domain profile. 37 114 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0379 Aed-Chr10 3061572 3068372 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0379 - - gmx:100789173 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0379 10 3061572 3068372 Aed10g0379 10 3061572 3068372 ECH