Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0377 ATGGCATCCTGGGTTTGGGGAAGGTCTAGGATGATCTTAATTCATCATCACAAAAATTTGGGCTTCTTGTTAGGACCATTTCTTAACCGCAGCTCTTGTTCCTCTTCTTCACAACAACACCGTCATGCATTGCTGGGTTATAAGAACCCACCTACCACCCTTTTCTGCTTCTCGCCGCGTCATGAATCAACCAAAGCTGAGGCACAATTGGAATTGGAGCACGATATTAATGTCACCGAGGATGACCCTAACCAGGTGATTGATTTTCCCGGAGGGAAAGTTGGATTTACTTCTGAAATGAGTTTCATTTCTGAGTCTCCTCAGAAAAGGGTGCCCTGTTATCGTGTTCTTGATGACAATGGTGAGATCGTTAAATACAACAACTATGTACAGGTTAGCAAGGAAATGGGTGTGAAGATGTATTCAGAGATGGTGACACTTCAAACAATGGACAGCATATTCTATGAAGTGCAGAGGCAAGGTAGAATTTCCTTCTACCTCACCCAAATGGGGGAAGAAGCAGTTAACATTGCTTCTGCAGCTGCACTTTCTCCTGATGATATCATTATGCCTCAGTACCGGGAGCCTGGAGTTCTATTGTGGCGTGGTTTTCCACTGCAACAATTTGTTCATCAGTGCTTTGGAAACACACATGATTTTGGGAAAGGCAGGCAAATGCCTATACATTATGGGTCTAACAAGCACAATTACTTCACAGTCTCATCCCCCATTGCAACACAGCTTCCTCAAGCTGTAGGGGCTGCTTATTCCCTTAAAATGGATGGGAAAAGTGCATGTGCTGTCACTTTTTGTGGGGATGGTGCCACCAGTGAGGGAGATTTTCATGCTGCTATGAATTTTGCAGCAGTAATGGAGGCCCCTGTTGTTTTTATCTGTCGTAATAATGGATGGGCCATCAGTACACCTGTAGAAGACCAATTTCGAAGTGATGGCATTGTAGTTAAAGGTAAAGCTTATGGCATCTGGGGTATCAGAGTAGATGGAAATGATGCTCTTGCTGTTTATAGTGCAGCTCTCACTTATAGAGTAGGACATCACTCTACATCTGATGATTCAACTAAGTACCGGGGAACCGATGAGATTGAATATTGGAAGATGGAAAGGAATCCTGTGAATAGATTCAAAAGATGGGTAGAAAGGAATGGTTGGTGGAGTGACAAGGATGAATTGGAGCTTAGAAGCAGTGTCAAGAAGCAGCTAAAGCATGCGATTGAGGTGGCAGAGAAAGCACAAAAGCCTCCACTTGAGGACATGTTTAATGATGTATATGACCAAGTGCCATCAAACCTTCAGGAGCAAGAGAGAGTACTTAGAAAAACCATTGAGAAGCATCCCAAAGACTACCCTTCCGATGTTCCTTTGTAG 1386 0.4358 MASWVWGRSRMILIHHHKNLGFLLGPFLNRSSCSSSSQQHRHALLGYKNPPTTLFCFSPRHESTKAEAQLELEHDINVTEDDPNQVIDFPGGKVGFTSEMSFISESPQKRVPCYRVLDDNGEIVKYNNYVQVSKEMGVKMYSEMVTLQTMDSIFYEVQRQGRISFYLTQMGEEAVNIASAAALSPDDIIMPQYREPGVLLWRGFPLQQFVHQCFGNTHDFGKGRQMPIHYGSNKHNYFTVSSPIATQLPQAVGAAYSLKMDGKSACAVTFCGDGATSEGDFHAAMNFAAVMEAPVVFICRNNGWAISTPVEDQFRSDGIVVKGKAYGIWGIRVDGNDALAVYSAALTYRVGHHSTSDDSTKYRGTDEIEYWKMERNPVNRFKRWVERNGWWSDKDELELRSSVKKQLKHAIEVAEKAQKPPLEDMFNDVYDQVPSNLQEQERVLRKTIEKHPKDYPSDVPL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0377 461 Pfam Dehydrogenase E1 component 143 345 IPR001017 GO:0016624
Aed10g0377 461 Pfam Dehydrogenase E1 component 346 421 IPR001017 GO:0016624
Aed10g0377 461 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 58 461 - -
Aed10g0377 461 CDD TPP_E1_PDC_ADC_BCADC 140 414 - -
Aed10g0377 461 Gene3D - 82 459 - -
Aed10g0377 461 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 110 456 IPR029061 -
Aed10g0377 461 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA 2, MITOCHONDRIAL 58 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0377 Aed-Chr10 3045689 3051876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0377 1 316 Acyl Lipid Metabolism Gene Families AT1G21400 60.625 8.92e-137 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0377 K00166 - gmx:100796766 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0377 10 3045689 3051876 Aed10g0377 10 3045689 3051876 ECH