Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0376 ATGGAAGTGACAAAAGACCCTAACAACTCACACCCGGATTCAGATTCCGAACTCGAACTCTACACCATCCCAGGCTCTTCAAAATGGTTCGCGTGGGAGGAGATTCACGAAACGGAGAGAACAGCGTTCAAGGAATACTTCGACGTGAGCTCGATTTCACGAACCCCGAAGATATACAAAGAGTACAGAGACTTCATCATCAACAAGTACAGAGAAGACCCTTCCAGGAGGCTCACCTTCACCGACGTCCGCAAGTCCCTCGTCGGCGACGTCACGTTCCTTTACAAGGTCTTCCTCTTCTTGGAGCATTGGGGTTTGATCAACTACGGCGCCCCCGCGCCTTCGGAGGAGAAAGAGGCGGAGGACGACGACGACGACGAGGAGCCGTGCAAGGTTCGACTCGAGGAAGGCGCCCCCACCGGGATTCGCGTGGCGGCCACGCCGAACTCGTTGAAGCCAATGCTGTTGCCTCGAAGCAACGCCAAGAGTGGCGGGAATGCGAGTAGGGCTTCTCTCAAATTGCCGCCCCTGGCGTCGTATTCCGATGTTTATGGTGATTTGATTAGACAGAAAGATGAAAGCTGTGGCCTTTGCGGTGAAAAATGTGGTTCTGGACATTACCGATGTACCACACCCCAGGATAATTTCACTATTTGTACGAATTGTTTCAAAGGCGGGAATTTTGGGGAGAAAAGGTCTGCGGAGGATTTTGTATTGAGTGAGTCAAGTGAAAATATTCGCAAACGTGACGCTGTCTGGACTGAGGCGGAAACTCTTCTCCTCTTGGAATCTGTTTTGAAGCACGGGGATGATTGGGAGCTTGTTGCTCAAAGTGTTCAAACCAAAACTAAACTTGATTGTATCTCGAAGCTTATTGAGCTGCCCTTTGGGGAGCTCATGCTGGGCCCTGCTCACAGAAATGTCAACAGTTGCGTTGCTAATGGCATCGTGGATAACAATGCGAAACAAGTTCGACCGTCTTTGTCTGACAACCAAGAAATTTCAAAGACAAAGGACCAACCTCCTGAGCTCACAAATGAAAATGAGCAGAATGGAGATGCTGTGATGGAAAGTCCTTCGAAAAGACAGCGTGTTGCTGCTCTTTCAGATTCCAGCAGTTCACTGATGAATCAGGTGGGACTGATCTCTAATGTGGTTGACCCTCATATCACAGCTGCTGCAGCTGATGCGGCTGTTTCAGCACTTTGTGATGAGAATTCTTGTCCAAGGGAGATATTTGACGTTGAAGAGGATTATTCACCAAGGTCGTCCATAAACCTATTAGCTCCTGAGGGTGAAGGTTTAGAGATGGAGAGGTCCTCTGTATCAGAAATACCTTTGACACTGCGTGTAAGAGCTGCCACTGCAACTGCTCTTGGAGCTGCTGCTGCACGAGCAAAGTTGTTTGCAGACCAGGAAGACAGAGAGATTGAACATTTAGTAGCAACTATTATTGAAGCACAGATGGAGAAATTGCTACACAAGGTTAAACATTTTGACGATCTGGAGCTGTTGATGGAAAAGGAACACGCTGAAATGGAAAATCTAAAAGAGTCTATCTTTTCTGAACGGATTGATGTGTTACACAGAACATTTAGATCTGGAATCAGTAGATGGAAGGATTATTCTTATGTAAAATCTTAG 1644 0.4738 MEVTKDPNNSHPDSDSELELYTIPGSSKWFAWEEIHETERTAFKEYFDVSSISRTPKIYKEYRDFIINKYREDPSRRLTFTDVRKSLVGDVTFLYKVFLFLEHWGLINYGAPAPSEEKEAEDDDDDEEPCKVRLEEGAPTGIRVAATPNSLKPMLLPRSNAKSGGNASRASLKLPPLASYSDVYGDLIRQKDESCGLCGEKCGSGHYRCTTPQDNFTICTNCFKGGNFGEKRSAEDFVLSESSENIRKRDAVWTEAETLLLLESVLKHGDDWELVAQSVQTKTKLDCISKLIELPFGELMLGPAHRNVNSCVANGIVDNNAKQVRPSLSDNQEISKTKDQPPELTNENEQNGDAVMESPSKRQRVAALSDSSSSLMNQVGLISNVVDPHITAAAADAAVSALCDENSCPREIFDVEEDYSPRSSINLLAPEGEGLEMERSSVSEIPLTLRVRAATATALGAAAARAKLFADQEDREIEHLVATIIEAQMEKLLHKVKHFDDLELLMEKEHAEMENLKESIFSERIDVLHRTFRSGISRWKDYSYVKS 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0376 547 MobiDBLite consensus disorder prediction 322 361 - -
Aed10g0376 547 Pfam SWIRM-associated region 1 457 530 IPR032451 -
Aed10g0376 547 SUPERFAMILY Homeodomain-like 27 110 IPR009057 -
Aed10g0376 547 CDD SANT 253 290 IPR001005 -
Aed10g0376 547 Gene3D - 250 297 - -
Aed10g0376 547 SUPERFAMILY Homeodomain-like 247 303 IPR009057 -
Aed10g0376 547 ProSiteProfiles Myb-like domain profile. 245 287 IPR001005 -
Aed10g0376 547 Pfam Myb-like DNA-binding domain 253 291 IPR001005 -
Aed10g0376 547 SMART sant 249 297 IPR001005 -
Aed10g0376 547 PANTHER BRAHMA ASSOCIATED PROTEIN 155 KDA 15 538 - -
Aed10g0376 547 Pfam SWIRM domain 26 109 IPR007526 GO:0005515
Aed10g0376 547 Gene3D - 27 113 IPR036388 -
Aed10g0376 547 ProSiteProfiles SANT domain profile. 248 299 IPR017884 -
Aed10g0376 547 ProSiteProfiles SWIRM domain profile. 21 118 IPR007526 GO:0005515
Aed10g0376 547 PANTHER SWI/SNF COMPLEX-RELATED 15 538 - -
Aed10g0376 547 Coils Coil 499 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0376 Aed-Chr10 3041265 3044793 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0376 K11649 - gmx:100790238 837.025