Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0370 ATGGGTGTCCAATATTCAAAGATGCTGCTACAGCTGCTACTTGTTTTGGTCTTTATTGCAGCAACTAAGACTCAACCTACGTCAAAGGCAAACAGCTGCGAAAGAAAATGTGGCGACGTGAGCATTCCCTTTCCTTTTGGCATGACGGAAGCTTGTTCCCTCAATGCCTCTTTTCTCATCATGTGCAACAAAACCTCTCATTCATCTTCCACCCCGTATTTGATGAACAAAAATAATGTAAGTTTCGCGAATTTCAATGTAGATGCAGACGTGTCTGTTCTAAACATCTCACTTAAGGGCCAACTACATATTTCATTGCCAGTAGCCAAGTCTTGCTGGAATAATACGGCTGGCGGACGAGTGTATAACAGCCTTCAGGAGCGGTACTTCAGCTTCAACCTCACGCCTTTTTACCTATCATCCAAGCAAAACAAGTTAACTGTATTGGGCGCTGACGCAGCTGGAGTACTATATGATGTTGAAGGTCTAAAAGTACAGCATACTACTGCATGCATGTCTTTGTACGATGGGCAGGGACCAGCACCTAGCGAGCCATGCTCTGGTATTATGTGTTGCGAGACTCTAGTACAACAGAGGCTATCAGAATTCCTCTATACTTCTTCTTCAGATATCTTCAATGATAACTACACTAGGCAACTTGAAACCTACCCATGCGGTTATACATTTCTGGTTAAGGACGGAGCCTACAAGTTATCTCGCACAGACTTGGTCAATCTTAACAGCAGTCACAACAACACGTTTCCCGTGGTTGCGGATTGGGCAGTGGGGGATCACACGTGCCAATATGCTGAAAAAAATGCTTCGGGTTATTTGTGTAAATCAAACCACAGTATATGTCAAGATGCAGAGGTGGGACCTGGTTATCACTGTAAATGCTCTCCTGATATTAATGAATGCATTGAGAAATCCGACGACTGTGTAAAGGAATCAATATGCCATGACAGTCCTGTAGGGAGCTACAGTTGTTCTTGTCCAAAAGGATACGAAGGAGATGGGAAAAAGAATGGAACAGGTTGTCGTCACAAATTCAGGAGTACCGGCATAATCATTATTGCTTTGAATGGAACTAACAGAAGAAGCATTCAATCTAGCTCTGATATTTCAAATCGAATTTCCTTGTCCTTGAGTGGTGGGAGATGA 1161 0.4315 MGVQYSKMLLQLLLVLVFIAATKTQPTSKANSCERKCGDVSIPFPFGMTEACSLNASFLIMCNKTSHSSSTPYLMNKNNVSFANFNVDADVSVLNISLKGQLHISLPVAKSCWNNTAGGRVYNSLQERYFSFNLTPFYLSSKQNKLTVLGADAAGVLYDVEGLKVQHTTACMSLYDGQGPAPSEPCSGIMCCETLVQQRLSEFLYTSSSDIFNDNYTRQLETYPCGYTFLVKDGAYKLSRTDLVNLNSSHNNTFPVVADWAVGDHTCQYAEKNASGYLCKSNHSICQDAEVGPGYHCKCSPDINECIEKSDDCVKESICHDSPVGSYSCSCPKGYEGDGKKNGTGCRHKFRSTGIIIIALNGTNRRSIQSSSDISNRISLSLSGGR 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0370 386 Pfam Calcium-binding EGF domain 302 346 IPR001881 GO:0005509
Aed10g0370 386 Gene3D Laminin 300 346 - -
Aed10g0370 386 PANTHER OSJNBA0016N04.9 PROTEIN 7 302 - -
Aed10g0370 386 SUPERFAMILY EGF/Laminin 302 339 - -
Aed10g0370 386 CDD EGF_CA 302 338 - -
Aed10g0370 386 PANTHER OSJNBA0016N04.9 PROTEIN 7 302 - -
Aed10g0370 386 SMART egfca_6 302 347 IPR001881 GO:0005509
Aed10g0370 386 Pfam Wall-associated receptor kinase galacturonan-binding 33 101 IPR025287 GO:0030247
Aed10g0370 386 ProSiteProfiles EGF-like domain profile. 302 338 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0370 Aed-Chr10 2998773 3002528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0370 5 334 Receptor kinase-like Gene Family AT1G21230 30.636 8.74e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0370 - - gsj:114410917 405.216